| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bphyt_3660 |
|---|
| Symbol | |
|---|
| ID | 6281438 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Burkholderia phytofirmans PsJN |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010681 |
|---|
| Strand | - |
|---|
| Start bp | 4102218 |
|---|
| End bp | 4103486 |
|---|
| Gene Length | 1269 bp |
|---|
| Protein Length | 422 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 65% |
|---|
| IMG OID | 642623249 |
|---|
| Product | lipolytic protein G-D-S-L family |
|---|
| Protein accession | YP_001897274 |
|---|
| Protein GI | 187925632 |
|---|
| COG category | [E] Amino acid transport and metabolism |
|---|
| COG ID | [COG2755] Lysophospholipase L1 and related esterases |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 1 |
|---|
| Plasmid unclonability p-value | 0.000000531698 |
|---|
| Plasmid hitchhiking | Yes |
|---|
| Plasmid clonability | hitchhiker |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 9 |
|---|
| Fosmid unclonability p-value | 0.0000015866 |
|---|
| Fosmid Hitchhiker | Yes |
|---|
| Fosmid clonability | hitchhiker |
|---|
| |
Sequence |
| Gene sequence | ATGACCATTC GCACCCTGGC TGCCGCATGC GGCGCGGCGC TGCTTGCCCA GCTTGCCGTT
TCCCCAACCG TTTTTGCCGC CGACACCCCG GCACATTGGG TCACCGCCTG GGCGACGGCG
CTGCAGCCTG TCCCACTGCG GGCGGACTTG CCGCCGCTCT ATCGCGCACC GGAAGTTGCC
GGGCGCACGG TGCGCCAGAT CGTCTATCCG ACGTTGACCG GAAAATTGGC GCGAGTCCAC
CTTAGCAACC GGTACGGCAA AACACCCCTC GTTATTGAAG ATCTGCGCAT CGCACGCTCG
GCGGGCGGCG CGGCGGCAAT TGGCGGCGGG ACGCACGTGA CGTTCGGGGG CAAGGGCGCG
GTCTCGATTC CGCCGGGTGG CGAGTTGGAC AGCGACCCGG TCGCAGTCGA TATTGCCGAA
GGTGCGCCTT ACGCTCTCAG CGCGTTTATG GGGCCCGAGC AGCGCATCGT GGCGTGGCAT
CGCGTTTCGA ACCAGGTGAA TTACGTTTCG GCGCCGGGTA ATCATGCGGC GGACGCTTCC
ACGGATGCGT TTCGCGGCCG GTTTACACAA TATGTGTGGA TGACCGGATT GTCGGTGGAC
GCGGCGCCTG CATCCGCCGC CGTTGTCGCG ATCGGTGACT CGATCACCGA TGGCATGCGC
TCCAGTCTGA ATCAGAATCG CCGCTGGCCT GACGCGTTGG CGCGCCGGTT TGCCGCTAGC
GGCGACCGGT CGACCGCGAT CGTCAATCTG GGAATCAGCG GCAACCGCTT GTTGAGCGAC
TCTCCTTGCT ACGGCGACGC GCTCGCGACG CGCTTCGAGC ATGACGTGCT CGCGCGCCCG
GGCGTCAAGA CGGCAATTCT GCTGATCGGA ATCAACGACA TCAACTTCGC GGCAATGCCG
CCGCGCAACG GTCTCGATTG CGACTTTCCG CACACCTCAG TGACAGCCGC CGATCTGATT
GCCGGCTACC AGCGGTTGAT CGCTACGGCC CGGCATGCCG GCGTGAAATT GTTCGGTGCG
ACGCTGACGC CGGCGTCGCT TCCGCCGCAG CGAGAAAGCA TTCGGCTCGC CGTCAACCAG
TGGATTCGGA CTAGTCATGC CTTCGACGGC GTCGTGGACT TCGACGCCGC GCTGCGTGAC
CCGGCGCAAG TGGAGCGCCT GCAGCGCAAC TTCGACAGTG GCGATCACAT CCATCCAAGC
GACGCGGGTT ATGCAGCAAT GGCGGAAGCA GTTCCGCTGG ACGCGGTAGT GAAATCTACG
CGCAAGTGA
|
|---|
| Protein sequence | MTIRTLAAAC GAALLAQLAV SPTVFAADTP AHWVTAWATA LQPVPLRADL PPLYRAPEVA
GRTVRQIVYP TLTGKLARVH LSNRYGKTPL VIEDLRIARS AGGAAAIGGG THVTFGGKGA
VSIPPGGELD SDPVAVDIAE GAPYALSAFM GPEQRIVAWH RVSNQVNYVS APGNHAADAS
TDAFRGRFTQ YVWMTGLSVD AAPASAAVVA IGDSITDGMR SSLNQNRRWP DALARRFAAS
GDRSTAIVNL GISGNRLLSD SPCYGDALAT RFEHDVLARP GVKTAILLIG INDINFAAMP
PRNGLDCDFP HTSVTAADLI AGYQRLIATA RHAGVKLFGA TLTPASLPPQ RESIRLAVNQ
WIRTSHAFDG VVDFDAALRD PAQVERLQRN FDSGDHIHPS DAGYAAMAEA VPLDAVVKST
RK
|
|---|
| |