| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bphyt_3649 |
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| Symbol | rpsL |
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| ID | 6283122 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia phytofirmans PsJN |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010681 |
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| Strand | - |
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| Start bp | 4079602 |
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| End bp | 4079982 |
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| Gene Length | 381 bp |
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| Protein Length | 126 aa |
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| Translation table | 11 |
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| GC content | 59% |
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| IMG OID | 642623229 |
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| Product | 30S ribosomal protein S12 |
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| Protein accession | YP_001897263 |
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| Protein GI | 187925621 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0048] Ribosomal protein S12 |
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| TIGRFAM ID | [TIGR00981] ribosomal protein S12, bacterial/organelle |
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Plasmid Coverage information |
| Num covering plasmid clones | 1 |
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| Plasmid unclonability p-value | 0.0000000111216 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | 5 |
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| Fosmid unclonability p-value | 0.000000000929733 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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| |
Sequence |
| Gene sequence | ATGCCAACCA TCAATCAACT GGTTCGCAAA GGCCGCCAGT CGGAAACGAC TAAGAGCAAG
AGCCCGGCCT TGCAGGACTG CCCCCAGCGT CGCGGCGTGT GCACCCGTGT GTACACCACG
ACGCCTAAGA AGCCTAACTC GGCACTGCGT AAGGTTGCCA AAGTTCGTTT GACGAACGGC
TTCGAAGTTA TTTCGTACAT CGGTGGTGAA GGCCACAACC TGCAGGAACA CTCGGTCGTG
CTGATTCGCG GCGGCCGTGT TAAGGACTTG CCGGGTGTGC GTTACCACAT GGTTCGCGGC
TCGCTGGATA CCCAGGGCGT CAAGGATCGT AAGCAGGCTC GCTCGAAGTA CGGTGCGAAG
CGTGCCAAGG CTGGCAAGTA A
|
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| Protein sequence | MPTINQLVRK GRQSETTKSK SPALQDCPQR RGVCTRVYTT TPKKPNSALR KVAKVRLTNG
FEVISYIGGE GHNLQEHSVV LIRGGRVKDL PGVRYHMVRG SLDTQGVKDR KQARSKYGAK
RAKAGK
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