| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bphyt_3630 |
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| Symbol | rpsH |
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| ID | 6282759 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia phytofirmans PsJN |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010681 |
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| Strand | - |
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| Start bp | 4067820 |
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| End bp | 4068215 |
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| Gene Length | 396 bp |
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| Protein Length | 131 aa |
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| Translation table | 11 |
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| GC content | 57% |
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| IMG OID | 642623210 |
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| Product | 30S ribosomal protein S8 |
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| Protein accession | YP_001897244 |
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| Protein GI | 187925602 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0096] Ribosomal protein S8 |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 4 |
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| Plasmid unclonability p-value | 0.00000497619 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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| |
Fosmid Coverage information |
| Num covering fosmid clones | 2 |
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| Fosmid unclonability p-value | 0.00000000000124793 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | decreased coverage |
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| |
Sequence |
| Gene sequence | ATGAGCATGA GTGATCCTAT CGCCGATATG CTGACTCGCA TCCGCAATGC GCAGATGGTT
GAGAAAGTCT CGGTGACTAT GCCCTCGTCG AAAGTCAAGG TTGCGATTGC GCAGGTCCTG
AAGGACGAAG GCTATATCGA TGATTTCGCA GTGAAGTCCG AAGGTGCGAA GTCTGAATTG
AACATCGTGT TGAAGTACTA CGCTGGCCGT CCGGTTATCG AGCGCATTGA ACGCGTCTCG
AAGCCTGGTC TGCGTGTGTA CCGCGGCCGT AACGACATCC CCGTGGTCAT GAATGGCCTC
GGCGTGGCAA TCGTGTCGAC GCCGAAGGGC GTGATGACGG ACCGCAAGGC GCGCGCAACG
GGCGTTGGCG GCGAAGTCAT CTGCTACGTC GCTTAA
|
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| Protein sequence | MSMSDPIADM LTRIRNAQMV EKVSVTMPSS KVKVAIAQVL KDEGYIDDFA VKSEGAKSEL
NIVLKYYAGR PVIERIERVS KPGLRVYRGR NDIPVVMNGL GVAIVSTPKG VMTDRKARAT
GVGGEVICYV A
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