| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bphyt_3628 |
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| Symbol | rplR |
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| ID | 6284691 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia phytofirmans PsJN |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010681 |
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| Strand | - |
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| Start bp | 4066893 |
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| End bp | 4067258 |
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| Gene Length | 366 bp |
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| Protein Length | 121 aa |
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| Translation table | 11 |
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| GC content | 63% |
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| IMG OID | 642623208 |
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| Product | 50S ribosomal protein L18 |
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| Protein accession | YP_001897242 |
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| Protein GI | 187925600 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0256] Ribosomal protein L18 |
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| TIGRFAM ID | [TIGR00060] ribosomal protein L18, bacterial type |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 5 |
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| Plasmid unclonability p-value | 0.0000201917 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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| |
Fosmid Coverage information |
| Num covering fosmid clones | 3 |
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| Fosmid unclonability p-value | 0.0000000000150693 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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| |
Sequence |
| Gene sequence | ATGGATAAGA CTCAATCTCG CCTGCGCCGC GCTCGTCAGA CGCGTATCAA GATCGCTGAG
CTGCAGGTCG CGCGTCTCGC CGTGCATCGC ACGAACACGC ACATCTACGC GCAAGTGTTC
TCGCCGTGCG GCACCAAGGT GCTCGCCAGC GCGTCGACGC TCGAGGCCGA AGTGCGTGCG
CAACTGGCTG ATCAGACGGG CAAGGGCGGC AACGTCAATG CTGCGACCCT GATCGGTAAG
CGCATCGCAG AAAAGGCTAA GGCTGCCGGC ATCGAATCCG TCGCCTTCGA CCGTTCGGGT
TTCCGTTACC ACGGCCGCGT GAAAGCGCTG GCTGATGCGG CGCGCGAAGC CGGACTCAAG
TTCTAA
|
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| Protein sequence | MDKTQSRLRR ARQTRIKIAE LQVARLAVHR TNTHIYAQVF SPCGTKVLAS ASTLEAEVRA
QLADQTGKGG NVNAATLIGK RIAEKAKAAG IESVAFDRSG FRYHGRVKAL ADAAREAGLK
F
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