| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bphyt_3627 |
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| Symbol | rpsE |
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| ID | 6284690 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia phytofirmans PsJN |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010681 |
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| Strand | - |
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| Start bp | 4066360 |
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| End bp | 4066878 |
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| Gene Length | 519 bp |
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| Protein Length | 172 aa |
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| Translation table | 11 |
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| GC content | 61% |
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| IMG OID | 642623207 |
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| Product | 30S ribosomal protein S5 |
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| Protein accession | YP_001897241 |
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| Protein GI | 187925599 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0098] Ribosomal protein S5 |
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| TIGRFAM ID | [TIGR01021] ribosomal protein S5, bacterial/organelle type |
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Plasmid Coverage information |
| Num covering plasmid clones | 5 |
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| Plasmid unclonability p-value | 0.0000356902 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | 3 |
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| Fosmid unclonability p-value | 0.0000000000160734 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | ATGGCAAAGA TGCAAGCGAA AGTTCAGGCT GACGAACGCG ACGACGGCCT TCGTGAAAAA
ATGATTTCGG TCAATCGCGT GACCAAGGTC GTGAAGGGTG GCCGGATTCT CGGTTTCGCC
GCACTGACCG TGGTTGGCGA CGGTGATGGC CGCGTCGGTA TGGGCAAGGG CAAGGCGAAG
GAAGTGCCGG TCGCTGTTCA GAAGGCGATG GAACAGGCTC GCCGCAACAT GTTCAAGGTG
CCGCTCAAGA ACGGTACTCT GCAACACGAA GTGCACGGTA AGCACGGCGC ATCGATGGTC
CTCCTGGCTC CGGCCAAGGA CGGTACCGGC GTGATCGCTG GCGGCCCGAT GCGCGCAGTG
TTCGACGTGA TGGGCGTGCA GAACGTTGTG GCCAAGAGCC ACGGTTCGAC GAACCCGTAT
AACCTCGTTC GTGCAACGCT CGACGGTCTG CGCAAGCAGT CCACGCCGGG CGACATCGCG
GCGAAGCGCG GCAAGTCCGT CGAAGATATT CTGGGCTAA
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| Protein sequence | MAKMQAKVQA DERDDGLREK MISVNRVTKV VKGGRILGFA ALTVVGDGDG RVGMGKGKAK
EVPVAVQKAM EQARRNMFKV PLKNGTLQHE VHGKHGASMV LLAPAKDGTG VIAGGPMRAV
FDVMGVQNVV AKSHGSTNPY NLVRATLDGL RKQSTPGDIA AKRGKSVEDI LG
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