Gene Bphyt_3621 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBphyt_3621 
SymbolrpsM 
ID6284337 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia phytofirmans PsJN 
KingdomBacteria 
Replicon accessionNC_010681 
Strand
Start bp4063539 
End bp4063904 
Gene Length366 bp 
Protein Length121 aa 
Translation table11 
GC content58% 
IMG OID642623201 
Product30S ribosomal protein S13 
Protein accessionYP_001897235 
Protein GI187925593 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG0099] Ribosomal protein S13 
TIGRFAM ID[TIGR03631] 30S ribosomal protein S13 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.00101768 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.00000000100437 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
ATGGCTCGTA TCGCAGGGGT TAACATCCCG AATCACCAGC ATACCGAAAT CGGCCTGACG 
GCTATTTACG GTGTCGGCCG CACGCGCTCG CGCGACATCT GCGTCGCTGC TGGTGTGGCA
TTTTCGAAGA AGGTCAAAGA CCTGAACGAC GCAGACCTCG AAAAGCTGCG TGAAGAAGTC
GGCAAGTTCA TCGTTGAAGG CGATCTGCGC CGTGAAACGA CGATGAACAT CAAGCGCCTG
ATGGATCTCG GCTGCTACCG TGGCGTTCGG CATCGTAAGG GCTTGCCCCT GCGCGGCCAA
CGTACGCGTA CGAATGCCCG TACGCGCAAG GGTCCGCGTC GTGCAGCGCA ATCGCTGAAG
AAGTAA
 
Protein sequence
MARIAGVNIP NHQHTEIGLT AIYGVGRTRS RDICVAAGVA FSKKVKDLND ADLEKLREEV 
GKFIVEGDLR RETTMNIKRL MDLGCYRGVR HRKGLPLRGQ RTRTNARTRK GPRRAAQSLK
K