Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Bphyt_3611 |
Symbol | |
ID | 6283150 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Burkholderia phytofirmans PsJN |
Kingdom | Bacteria |
Replicon accession | NC_010681 |
Strand | - |
Start bp | 4055168 |
End bp | 4055821 |
Gene Length | 654 bp |
Protein Length | 217 aa |
Translation table | 11 |
GC content | 62% |
IMG OID | 642623191 |
Product | cytochrome c class I |
Protein accession | YP_001897225 |
Protein GI | 187925583 |
COG category | [C] Energy production and conversion |
COG ID | [COG2863] Cytochrome c553 |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 8 |
Plasmid unclonability p-value | 0.00161979 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
Num covering fosmid clones | 7 |
Fosmid unclonability p-value | 0.0000000311228 |
Fosmid Hitchhiker | Yes |
Fosmid clonability | hitchhiker |
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Sequence |
Gene sequence | ATGAATCGAC TGAGCAAGAC TCTGATGGTG CTTCATGTAG CGGCAGGTCT TTCAGGTTTG GCAATTCAGG CACGAGCAGC AGAACCGGCA AAGCCGGACG TCAATCGGGG GCAGGCAATC GCGGTGCAGG TATGCGCGTC ATGTCACGGG GCAGACGGCA ATAGCGCTGG CGGCGCATAC CCGAAGCTGG CGGGCCAGCA CCCTGAGTAT CTCGTCAAGC AGCTCAAGGA CTTCAAGACC CAGCCGGGCG CCAAGCAGCC AGCGCGCAAC AATGCGATCA TGGCGGGCAT GGCGGCAGCG TTGTCTGATC AGGACATGGT CAACGTTGCG GCGTATTTTG CGGCGCAGAC CCCGAAGCCA GGCTACGCGC ACAACAAAGA CACCGTTCCG CTCGGCCAGA AGATTTATCG CGGCGGGATC GCCGACAAGG GCGTGCCGGC GTGCGCGAGC TGTCACGGGC CGACCGGTCA AGGGATTCCG TCGCAGTATC CGCGGCTCTC GGGGCAGTGG TCGGAATACA CGGTGGCGCA GTTGCTGGCG TTCACGCAAG GTCCGGGCGC GCGTAACAAC AACGAGCCGA TGCATGCGAT CGCAACGCGT CTGTCGGATA GTGAGATCAA GGCAGTAGCC GATTACATCG CGGGCTTGCA CTAG
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Protein sequence | MNRLSKTLMV LHVAAGLSGL AIQARAAEPA KPDVNRGQAI AVQVCASCHG ADGNSAGGAY PKLAGQHPEY LVKQLKDFKT QPGAKQPARN NAIMAGMAAA LSDQDMVNVA AYFAAQTPKP GYAHNKDTVP LGQKIYRGGI ADKGVPACAS CHGPTGQGIP SQYPRLSGQW SEYTVAQLLA FTQGPGARNN NEPMHAIATR LSDSEIKAVA DYIAGLH
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