| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bphyt_3603 |
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| Symbol | |
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| ID | 6284158 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia phytofirmans PsJN |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010681 |
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| Strand | + |
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| Start bp | 4045074 |
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| End bp | 4047473 |
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| Gene Length | 2400 bp |
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| Protein Length | 799 aa |
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| Translation table | 11 |
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| GC content | 63% |
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| IMG OID | 642623183 |
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| Product | penicillin-binding protein, 1A family |
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| Protein accession | YP_001897217 |
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| Protein GI | 187925575 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG5009] Membrane carboxypeptidase/penicillin-binding protein |
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| TIGRFAM ID | [TIGR02074] penicillin-binding protein, 1A family |
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Plasmid Coverage information |
| Num covering plasmid clones | 5 |
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| Plasmid unclonability p-value | 0.00689676 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | 7 |
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| Fosmid unclonability p-value | 0.000000108854 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | ATGCAATCCA CGTCTTCTAC GTCCCCGCCG CCCGCGCCTA AAAAGCGCAA ACGCCCGTTG
TGGCTGAAGC TCATCCTGGG CTTCGTGGGT CTGATCGTCG CAGGCATTCT GTGCGTGCTG
CTGGTGCTCG GCTATGCGCT CGTCGTCGCC ACGCCCAACC TGCCGTCGCT CGATGCGTTG
ACCGACTACC GGCCGAAGGT GCCGCTGCGC ATCTATACGG CCGACCATGT GCTGATCGGC
GAATTCGGCG AGGAACGGCG CGACATCGTC CATATTCAGG ATGTGCCCGA TAGTCTGAAG
AAGGCGATCC TCGCCATCGA AGACGCGCGC TTCTACGATC ACGGCGGCGT CGACCTCACG
GGCATTGCGC GCGCGGGCTT CGTCGCGCTG ACCAACGGCC ACGCCACGCA GGGCGCAAGC
ACGATCACCA TGCAGGTGGC GCGCAACTTC TTCCTCTCGA GTGAAAAGAC CTACACGCGC
AAGATCTACG AGATGCTGCT CGCGTACAAG ATCGAGTCGA AGCTGTCCAA GGATCAGATT
CTCGAGGTGT ACATGAATCA GATCTATCTC GGTCAGCGCG CCTACGGGTT TGCGAGCGCG
GCGCGCGTAT ATTTCGGCAA GGACCTGAAG GAACTGACGT TGGCGGAATC GGCCATGCTG
GCCGGCTTGC CGAAGGCGCC GTCAGCGTAT AACCCGGTCG TCAATCCGAA GCGTGCGAAG
GTGCGTCAGG AGTACATCCT GCAGCGCATG TACGAGTTGC ACTACATCAC GCAGGAACAA
TACGACGAAG CGAGCAAGCA GCCGCTCGTG GTCAAGGGCG CGGGCAAGGA ATTCAGCGTG
CACGCGGAGT ACGTCGCGGA AATGGTGCGT CAGATGATGT ACGCGCAGTA TCGTGAGGAA
GCCTATACGC GCGGCCTGAA CGTGGTGACC ACGATCGATT CTGCCGATCA GGACGTCGCA
TACCGCGCGC TGCGCAAAGG TCTGATGGAC TACGAACGGC GTCACGGCTA TCGCGGTCCG
GAGGCGTTCA TCGATCTGCC GTCAGACGCC GACGACCGCG AGCAGGCCAT CGACGACGCG
CTGCTCGAAC ACCCGGACAA CGGCGAGATC ATTGCCGCCG TGGTCACCGC GGCGAGTCCG
AAGCAGGTGC AGGCTGCTTT CATCGACGGC AATGTCGCGA CGATCCAGGG CGACGGCCTG
CGCTTCGCGC AGTTCGCGCT CGGTCCGCGC GCGCAGCCGA ATCAACGCGT GCGGCCCGGC
GCGATCATCC GGCTCGTCAA GAACGACGAT GGCAACTGGT CGATCACGCA ATTGCCGCAA
GTGGAGGGCG CGTTCGTTTC GGTGATCCCG CAAGATGGCG CGATCCGCGC GCTGGTCGGC
GGTTTCGACT TCAACAAGAA CAAGTTCAAT CACGTCACGC AGGCGTGGCG TCAGCCGGGG
TCGAGTTTCA AACCGTTTAT CTATTCGGCG TCGCTCGAAA AAGGACTCGG ACCGGCGACC
ATCATCAATG ACGCGCCGCT CTTTTTCAGT GCCGCTGAAA CGGGCGGCCA GGCGTGGGAA
CCGAAGAACT ACGGCGGCGG CTTCGACGGC CCGATGACCA TGCGCACCGC GTTACAGCGC
TCGAAGAACC TGGTGTCGAT TCGTATCCTG AACCAGATCG GCACGAAGTA CGCGCAGCAG
TACATCACGC GTTTCGGCTT CGACGCGGAT CGTCACCCGG CTTATCTGCC GATGGCGCTG
GGCGCCGGTC TCGTCACGCC GTTGCAGATG GCGGGTGCGT TCTCGGTGTT CGCCAACGGC
GGCTATCGGA TCAATCCGTA TCTGATCGCC GAAGTCACGG ATCAGCGCGG CATGGTGGTC
GCCCATGCGC AACCGCTGGT CGCCGCGCAG AGCGCGCCGC ACGCGATCGA GCCGCGCAAT
GCGTACGTGA TGAACAGCCT GCTGCAAAGC GTCGCGCAAC GCGGCACGGG CGCCAAGACC
AACGTCTTGA AGCGCACCGA TCTCGCCGGC AAAACGGGCA CGACCAACGA TTCGCGCGAC
GCGTGGTTCG CCGGTTATCA GCACACCCTC ACTGCGATTG CGTGGATCGG CTACGACAAC
CCGCGCAGTC TCGGCGACAA GGAAACCGGT GGCGGCCTCG CGTTGCCGGT GTGGGTCGAA
TACATGGGTC GCGCGCTGAA GGGTGTGCCG GAGTACAAGA TGCCGAAGCC CGACGACGTC
ACGGAAATCG GCTCGGAGCT TTATTTCGAC GACTTCACGC CGGGGAATGG TTTCGTTGCC
ACGGTCGGCG TCAGTCAGGC GACACTGGAT GCGCAGTCGA GCGCTGCGTC GGCCGCCGCG
CCTGAGCAGG TCGGCGAGCA GGAGAAGCAG GACATCATGA ATCTGTTCCG CGGACACTGA
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| Protein sequence | MQSTSSTSPP PAPKKRKRPL WLKLILGFVG LIVAGILCVL LVLGYALVVA TPNLPSLDAL
TDYRPKVPLR IYTADHVLIG EFGEERRDIV HIQDVPDSLK KAILAIEDAR FYDHGGVDLT
GIARAGFVAL TNGHATQGAS TITMQVARNF FLSSEKTYTR KIYEMLLAYK IESKLSKDQI
LEVYMNQIYL GQRAYGFASA ARVYFGKDLK ELTLAESAML AGLPKAPSAY NPVVNPKRAK
VRQEYILQRM YELHYITQEQ YDEASKQPLV VKGAGKEFSV HAEYVAEMVR QMMYAQYREE
AYTRGLNVVT TIDSADQDVA YRALRKGLMD YERRHGYRGP EAFIDLPSDA DDREQAIDDA
LLEHPDNGEI IAAVVTAASP KQVQAAFIDG NVATIQGDGL RFAQFALGPR AQPNQRVRPG
AIIRLVKNDD GNWSITQLPQ VEGAFVSVIP QDGAIRALVG GFDFNKNKFN HVTQAWRQPG
SSFKPFIYSA SLEKGLGPAT IINDAPLFFS AAETGGQAWE PKNYGGGFDG PMTMRTALQR
SKNLVSIRIL NQIGTKYAQQ YITRFGFDAD RHPAYLPMAL GAGLVTPLQM AGAFSVFANG
GYRINPYLIA EVTDQRGMVV AHAQPLVAAQ SAPHAIEPRN AYVMNSLLQS VAQRGTGAKT
NVLKRTDLAG KTGTTNDSRD AWFAGYQHTL TAIAWIGYDN PRSLGDKETG GGLALPVWVE
YMGRALKGVP EYKMPKPDDV TEIGSELYFD DFTPGNGFVA TVGVSQATLD AQSSAASAAA
PEQVGEQEKQ DIMNLFRGH
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