Gene Bphyt_3598 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBphyt_3598 
SymbolaroK 
ID6283026 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia phytofirmans PsJN 
KingdomBacteria 
Replicon accessionNC_010681 
Strand
Start bp4039660 
End bp4040211 
Gene Length552 bp 
Protein Length183 aa 
Translation table11 
GC content62% 
IMG OID642623178 
Productshikimate kinase 
Protein accessionYP_001897212 
Protein GI187925570 
COG category[E] Amino acid transport and metabolism 
COG ID[COG0703] Shikimate kinase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.000887516 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value2.52706e-08 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
TTGCAAGCGC GGGACGCACA CGCCAATGTA TTTTTCGTAG GGCTCATGGG GGCAGGGAAA 
ACCACCGTGG GCCGGGCCAT TGCGCGCCGT CTCGATCGCC CGTTCTTCGA TTCCGACCAT
GAAATCGAGG CGCGCACGGG CGCGCGCATC CCGGTGATCT TCGAGCTGGA GGGCGAAGCG
GGATTTCGCG AGCGCGAAGC CAGCGTGATT TCCGACCTGA CCGGACGTGA CAGTATCGTC
CTCGCCACCG GCGGCGGCGC GATACTGCGG CCGGAAAACC GCGAAGCGCT GCAAAATCGC
GGAGTGGTGA TCTATTTGCG AGCCAATCCG CACGACCTGT GGCTGCGCAC CCGGCGCGAC
AAGAATCGTC CGCTGTTGCA GACCGAAGAC CCCAAAGCGC GTCTCGAAGC ACTCTACGAA
GTGCGCGATC CGTTATACCG GGAATGCGCG CATTTCGTGA TCGAAACCGG CCGACCTTCG
GTCAACGGAC TCGTCAACAT GGTTCTGATG CAGCTCGAGA TGGCCGGCGT CGCCAAACAT
CCTGCGTCAT AA
 
Protein sequence
MQARDAHANV FFVGLMGAGK TTVGRAIARR LDRPFFDSDH EIEARTGARI PVIFELEGEA 
GFREREASVI SDLTGRDSIV LATGGGAILR PENREALQNR GVVIYLRANP HDLWLRTRRD
KNRPLLQTED PKARLEALYE VRDPLYRECA HFVIETGRPS VNGLVNMVLM QLEMAGVAKH
PAS