Gene Bphyt_3593 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBphyt_3593 
Symbol 
ID6282072 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia phytofirmans PsJN 
KingdomBacteria 
Replicon accessionNC_010681 
Strand
Start bp4035717 
End bp4036442 
Gene Length726 bp 
Protein Length241 aa 
Translation table11 
GC content58% 
IMG OID642623173 
ProductOmpW family protein 
Protein accessionYP_001897207 
Protein GI187925565 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG3047] Outer membrane protein W 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones11 
Plasmid unclonability p-value0.0192087 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.00000065316 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
ATGAAATTAA AACAGGCCGT AACGGGGATC GCGGCGCTAG CCTGCATGAC AACGGCAGCA 
CACGCGCAAT CGGCCGGTAG CTTTTACGTC ACCTCGGGCT GGTTCCATCT AGCGCCTCAA
TCGAGCAGCG ACCCGCTGAA AGTGACGAGC ATTGGGGGCA GCCCGACCAA CATCACCGAA
GCCAACACCG GTGCAAAACT GGATTCCGCC GACACCATCG GCTTTACCGC GGGTTACTTC
GTCACCGATC ACATCGCGAC CGAATTCGTG ATCGGCGTGC CGCCCAAGTT CGACCTGGAA
GGCTCGGGTA GCCTCGCCCA GTTCGGCAAG CTGGGGCAGG CAAAACAGTG GAGCCCGACT
CTGCTGTTCA AGTACTACTT CAATGCTCCG ACCGCTGCAT TCCGCCCGTA CCTCGGCATC
GGCGTGAGCC GGGTTTCGTT CACCGACGAA AAGATCACCA ACAGCGCGTT CGAGGCCAAT
GTCCTGCATG GTCCGACCAC TGTTACTACG GATAGTTCGT GGGAGCCGGT GTTTAATGCC
GGCTTCACTT ACGCATTCAC CCAGCACTGG TTCGCGGGCG TATCAATTTC TTACCTGCCG
CTCAGCACCA CCGCCAAGCT CAACACCGCG GCCAACACGC CGGTGGGCAC GTTGAATGTG
CAATCGGAAA CCAAGATCAA ACTGAACCCG ATCGTCACCT ACGTCAACAT CGGTTACCGT
TTCTAA
 
Protein sequence
MKLKQAVTGI AALACMTTAA HAQSAGSFYV TSGWFHLAPQ SSSDPLKVTS IGGSPTNITE 
ANTGAKLDSA DTIGFTAGYF VTDHIATEFV IGVPPKFDLE GSGSLAQFGK LGQAKQWSPT
LLFKYYFNAP TAAFRPYLGI GVSRVSFTDE KITNSAFEAN VLHGPTTVTT DSSWEPVFNA
GFTYAFTQHW FAGVSISYLP LSTTAKLNTA ANTPVGTLNV QSETKIKLNP IVTYVNIGYR
F