Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Bphyt_3593 |
Symbol | |
ID | 6282072 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Burkholderia phytofirmans PsJN |
Kingdom | Bacteria |
Replicon accession | NC_010681 |
Strand | + |
Start bp | 4035717 |
End bp | 4036442 |
Gene Length | 726 bp |
Protein Length | 241 aa |
Translation table | 11 |
GC content | 58% |
IMG OID | 642623173 |
Product | OmpW family protein |
Protein accession | YP_001897207 |
Protein GI | 187925565 |
COG category | [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG3047] Outer membrane protein W |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 11 |
Plasmid unclonability p-value | 0.0192087 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 9 |
Fosmid unclonability p-value | 0.00000065316 |
Fosmid Hitchhiker | Yes |
Fosmid clonability | hitchhiker |
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Sequence |
Gene sequence | ATGAAATTAA AACAGGCCGT AACGGGGATC GCGGCGCTAG CCTGCATGAC AACGGCAGCA CACGCGCAAT CGGCCGGTAG CTTTTACGTC ACCTCGGGCT GGTTCCATCT AGCGCCTCAA TCGAGCAGCG ACCCGCTGAA AGTGACGAGC ATTGGGGGCA GCCCGACCAA CATCACCGAA GCCAACACCG GTGCAAAACT GGATTCCGCC GACACCATCG GCTTTACCGC GGGTTACTTC GTCACCGATC ACATCGCGAC CGAATTCGTG ATCGGCGTGC CGCCCAAGTT CGACCTGGAA GGCTCGGGTA GCCTCGCCCA GTTCGGCAAG CTGGGGCAGG CAAAACAGTG GAGCCCGACT CTGCTGTTCA AGTACTACTT CAATGCTCCG ACCGCTGCAT TCCGCCCGTA CCTCGGCATC GGCGTGAGCC GGGTTTCGTT CACCGACGAA AAGATCACCA ACAGCGCGTT CGAGGCCAAT GTCCTGCATG GTCCGACCAC TGTTACTACG GATAGTTCGT GGGAGCCGGT GTTTAATGCC GGCTTCACTT ACGCATTCAC CCAGCACTGG TTCGCGGGCG TATCAATTTC TTACCTGCCG CTCAGCACCA CCGCCAAGCT CAACACCGCG GCCAACACGC CGGTGGGCAC GTTGAATGTG CAATCGGAAA CCAAGATCAA ACTGAACCCG ATCGTCACCT ACGTCAACAT CGGTTACCGT TTCTAA
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Protein sequence | MKLKQAVTGI AALACMTTAA HAQSAGSFYV TSGWFHLAPQ SSSDPLKVTS IGGSPTNITE ANTGAKLDSA DTIGFTAGYF VTDHIATEFV IGVPPKFDLE GSGSLAQFGK LGQAKQWSPT LLFKYYFNAP TAAFRPYLGI GVSRVSFTDE KITNSAFEAN VLHGPTTVTT DSSWEPVFNA GFTYAFTQHW FAGVSISYLP LSTTAKLNTA ANTPVGTLNV QSETKIKLNP IVTYVNIGYR F
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