| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bphyt_3562 |
|---|
| Symbol | |
|---|
| ID | 6282203 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Burkholderia phytofirmans PsJN |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010681 |
|---|
| Strand | - |
|---|
| Start bp | 4002815 |
|---|
| End bp | 4004077 |
|---|
| Gene Length | 1263 bp |
|---|
| Protein Length | 420 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 64% |
|---|
| IMG OID | 642623142 |
|---|
| Product | UDP-N-acetylglucosamine 1-carboxyvinyltransferase |
|---|
| Protein accession | YP_001897176 |
|---|
| Protein GI | 187925534 |
|---|
| COG category | [M] Cell wall/membrane/envelope biogenesis |
|---|
| COG ID | [COG0766] UDP-N-acetylglucosamine enolpyruvyl transferase |
|---|
| TIGRFAM ID | [TIGR01072] UDP-N-acetylglucosamine 1-carboxyvinyltransferase |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 16 |
|---|
| Plasmid unclonability p-value | 0.601087 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 13 |
|---|
| Fosmid unclonability p-value | 0.000068408 |
|---|
| Fosmid Hitchhiker | Yes |
|---|
| Fosmid clonability | hitchhiker |
|---|
| |
Sequence |
| Gene sequence | ATGGATAAAC TCGTCATTGA AGGTGGCTAC CCGCTGTCGG GTGAAGTCGT CGTCTCGGGT
GCGAAGAATG CGGCGTTGCC GATTCTGTGC GCGAGTCTGC TCAGCGCGGA GCCGGTGCAT
CTGGAAAACG TGCCCGACCT GCAGGACGTG CGCACGATGC TCAAGTTGCT CGGCCAGATG
GGCGTGCAGA TCGAAAGCGG CGATGGGCGC GTGTCGCTGA ACGCGTCGAA GGTGGATAAC
CTCGTCGCGC CGTACGAAAT GGTGAAGACC ATGCGCGCGT CGATCCTCGT GCTCGGCCCG
CTGGTCGCGC GCTTCGGTCA CGCGCGGGTT TCGCTGCCGG GCGGCTGCGC GATCGGTGCG
CGTCCGGTAG ATCAGCACAT CAAGGGCCTG CAGGCCATGG GTGCTGAGAT CACGATCGAG
CACGGCTTTA TCGAAGCGCG CGCGAAGCGT CTGAAGGGCG CGCGTATCGT CACCGACATG
ATCACCGTCA CCGGCACGGA GAATCTGCTG ATGGCAGCCG TGCTGGCCGA GGGCGAGACC
GTCATCGAGA ACGCGGCGCG CGAGCCGGAA GTCGGCGACC TTGCGCATTT GCTGGTCGCG
ATGGGCGCGA AGATCGAAGG CATCGGCACG GATCGCCTCG TGATCCAGGG TGTCGACAAG
CTGCATGGCG CGAAGCACAC GGTGATTCCG GATCGGATCG AAGCCGGCAC CTTCCTGTGC
GCGGTAGCGG CGGCAGGCGG AGACGTCACA CTGCGTAAAG TGCGTCCGCT GATTCTCGAA
GCGGTCACCG AAAAGCTGCG CGAAGCCGGC GTCACGGTCG AAGAAGGCGA CGACTGGATG
CGCGTGCGCA TGGACAAGCG TCCGAGCGCG GTCACCTTTC GCACCTCCGA ATACCCGGCG
TTCCCGACCG ACATGCAGGC GCAGTTCATG GCGCTGAACA CGATCGCGAC GGGCACTTCG
CAGGTCGTCG AGACGATCTT CGAAAACCGC TTCATGCACG TGCAGGAATT GAACCGCCTC
GGCGCCAACA TCACGATCGA CGGCAACACC GCGCTCGTGA CCGGCGTCGA ACAGCTTTCG
GGCGCGAAGG TGATGGCGAC CGATCTGCGC GCCTCCGCGA GTCTCGTGAT CGCCGCGTTG
CGCGCCGACG GTGAAACGCT GATCGACCGG ATCTATCACC TCGACCGTGG TTACGACCGC
ATGGAAACCA AGCTCACCGC TCTCGGCGCG AAGGTGCGCC GGGTCTCGGG GAGCCAGGCA
TGA
|
|---|
| Protein sequence | MDKLVIEGGY PLSGEVVVSG AKNAALPILC ASLLSAEPVH LENVPDLQDV RTMLKLLGQM
GVQIESGDGR VSLNASKVDN LVAPYEMVKT MRASILVLGP LVARFGHARV SLPGGCAIGA
RPVDQHIKGL QAMGAEITIE HGFIEARAKR LKGARIVTDM ITVTGTENLL MAAVLAEGET
VIENAAREPE VGDLAHLLVA MGAKIEGIGT DRLVIQGVDK LHGAKHTVIP DRIEAGTFLC
AVAAAGGDVT LRKVRPLILE AVTEKLREAG VTVEEGDDWM RVRMDKRPSA VTFRTSEYPA
FPTDMQAQFM ALNTIATGTS QVVETIFENR FMHVQELNRL GANITIDGNT ALVTGVEQLS
GAKVMATDLR ASASLVIAAL RADGETLIDR IYHLDRGYDR METKLTALGA KVRRVSGSQA
|
|---|
| |