| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bphyt_3559 |
|---|
| Symbol | |
|---|
| ID | 6282200 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Burkholderia phytofirmans PsJN |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010681 |
|---|
| Strand | - |
|---|
| Start bp | 3999501 |
|---|
| End bp | 4000571 |
|---|
| Gene Length | 1071 bp |
|---|
| Protein Length | 356 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 63% |
|---|
| IMG OID | 642623139 |
|---|
| Product | histidinol-phosphate aminotransferase |
|---|
| Protein accession | YP_001897173 |
|---|
| Protein GI | 187925531 |
|---|
| COG category | [E] Amino acid transport and metabolism |
|---|
| COG ID | [COG0079] Histidinol-phosphate/aromatic aminotransferase and cobyric acid decarboxylase |
|---|
| TIGRFAM ID | [TIGR01141] histidinol-phosphate aminotransferase |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 21 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 13 |
|---|
| Fosmid unclonability p-value | 0.0000559348 |
|---|
| Fosmid Hitchhiker | Yes |
|---|
| Fosmid clonability | hitchhiker |
|---|
| |
Sequence |
| Gene sequence | ATGACGACAC CTCAAGACAT CATCCGCCGC GACGTGCTCG CGATGACGAG CTATCCGGTT
CCGGACGCCA CGGGCTACAT CAAGCTCGAC GCGATGGAAA ATCCGTTCAC GTTGCCGCCG
GTGCTGGCCG CGCATCTGGG CGAGCATCTG GCCGGCGTCG CGCTGAATCG CTATCCGGCG
CCGCGTCCGG ATGCGCTGAT CGAGAAGATC AAGCGGGTGA TGCAAGTGCC GGCCGGCTGC
GACGTGCTGC TCGGCAACGG CTCGGATGAA ATCATCAGCA TGGTGTCGGT CGCGTGCGCG
CAGCCGGGCG CCAAGGTGCT CGCGCCGGTG CCGGGATTCG TGATGTATCA GATGTCGGCG
AAGCTGGCGA ATCTCGAGTT CATCGGCGTG CCGCTGAAAG CGGATTTCAC ACTCGACACC
GAAGCGATGC TAGCCGCGAT CGCCGAGCAC CAGCCGGCGA TCATCTATCT TGCCTACCCG
AACAACCCGA CCGGCACGCT GTACGACGAC GCCGACATGG AGCGCATCAT CGCCGCGGCC
AATAAGAGCC TCGTGGTGAT CGACGAGGCT TATCAGCCGT TCGCGCAACA GAGCTGGCTG
CCGCGCGCCG ATGCGTTCGA CAACGTCGTC GTGATGCGCA CGGTGTCCAA GCTCGGCCTT
GCCGGCATCC GTCTCGGCTA TCTGGTCGGC AAACCCGGCT GGCTGACCGA ATTCGACAAA
GTGCGGCCGC CGTACAATAC CAACGTGCTC ACGCAAGCCG CCGCCGATTT CCTGCTCGAC
CACGTCGACG TACTCGACTC GCAAGCGGCG CAATTGCGCG AAGAACGCAC GAAACTCGCG
CGCGCGGTGT CCCAATTACC GGGCGCCGAA GTGTTCCCGA GCGCCGGCAA TTTCCTGCTG
GTGCGCGTGC CCGACGCGTC GGTTCTGTTC GAAACGCTAC TGACGGCGCG GGTTCTGATC
AAAAACGTGA GTAAAATGCA TCCATTGCTG GCCAATTGCG TGCGGTTGAC CGTCGGTTCG
CCGGAAGAAA ACGCCCAATT GCTCGCTGGA CTGAAACTCG TGCTGAACTG A
|
|---|
| Protein sequence | MTTPQDIIRR DVLAMTSYPV PDATGYIKLD AMENPFTLPP VLAAHLGEHL AGVALNRYPA
PRPDALIEKI KRVMQVPAGC DVLLGNGSDE IISMVSVACA QPGAKVLAPV PGFVMYQMSA
KLANLEFIGV PLKADFTLDT EAMLAAIAEH QPAIIYLAYP NNPTGTLYDD ADMERIIAAA
NKSLVVIDEA YQPFAQQSWL PRADAFDNVV VMRTVSKLGL AGIRLGYLVG KPGWLTEFDK
VRPPYNTNVL TQAAADFLLD HVDVLDSQAA QLREERTKLA RAVSQLPGAE VFPSAGNFLL
VRVPDASVLF ETLLTARVLI KNVSKMHPLL ANCVRLTVGS PEENAQLLAG LKLVLN
|
|---|
| |