| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bphyt_3554 |
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| Symbol | |
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| ID | 6282769 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia phytofirmans PsJN |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010681 |
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| Strand | - |
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| Start bp | 3995469 |
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| End bp | 3996242 |
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| Gene Length | 774 bp |
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| Protein Length | 257 aa |
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| Translation table | 11 |
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| GC content | 66% |
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| IMG OID | 642623134 |
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| Product | imidazole glycerol phosphate synthase subunit HisF |
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| Protein accession | YP_001897168 |
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| Protein GI | 187925526 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0107] Imidazoleglycerol-phosphate synthase |
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| TIGRFAM ID | [TIGR00735] imidazoleglycerol phosphate synthase, cyclase subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | 14 |
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| Plasmid unclonability p-value | 0.0958166 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 15 |
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| Fosmid unclonability p-value | 0.000231442 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | ATGGCTCTAG CTAAACGCAT CATTCCCTGT CTCGACGTCA CGGCTGGCCG CGTGGTCAAG
GGCGTCAACT TCGTCGAACT GCGCGATGCG GGCGACCCGG TTGAAATCGC CCGCCGCTAC
GACGATCAGG GCGCCGACGA ACTCACCTTC CTCGACATCA CCGCGACCTC GGATCAGCGC
GATCTGATCC TGCCGATCAT CGAAGCGGTC GCGTCGCAAG TGTTCATTCC GCTGACGGTC
GGCGGCGGCG TGCGCGCCGT CGAAGACGTG CGGCGTCTGC TGAACGCGGG CGCGGACAAG
ATCAGCATGA ACTCGTCGGC GGTGGCGAAT CCGCAACTCG TGAAAGACGC CACGGACAAA
TACGGCTCGC AGTGCATCGT CGTCGCGATC GACGCAAAGC GCGTCTCCGC GGACGGCGAG
CCGCCGCGCT GGGAAGTCTT CACGCATGGC GGCCGCAAGG CCACCGGGCT GGAAGCGGTC
GAATGGGCGC GCAAGATGGC CGAACTCGGC GCCGGCGAAA TCCTGCTCAC CAGCATGGAC
CGCGACGGCA CCAAGAGCGG CTTCGACCTC GCGCTTACGC GCGCCGTGTC CGATGCGGTG
CCGATTCCGG TGATCGCTTC GGGCGGCGTG GGCAACCTGC AACATTTGGC CGACGGCATC
AAAAACGGCC ACGCGGACGC GGTGCTCGCC GCGAGCATCT TCCACTACGG CGAACACACC
GTGGGCGAGG CCAAGCGCTT CATGGCCGAT CAGGGCATTT CGGTGAGGTT GTGA
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| Protein sequence | MALAKRIIPC LDVTAGRVVK GVNFVELRDA GDPVEIARRY DDQGADELTF LDITATSDQR
DLILPIIEAV ASQVFIPLTV GGGVRAVEDV RRLLNAGADK ISMNSSAVAN PQLVKDATDK
YGSQCIVVAI DAKRVSADGE PPRWEVFTHG GRKATGLEAV EWARKMAELG AGEILLTSMD
RDGTKSGFDL ALTRAVSDAV PIPVIASGGV GNLQHLADGI KNGHADAVLA ASIFHYGEHT
VGEAKRFMAD QGISVRL
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