| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bphyt_3528 |
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| Symbol | |
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| ID | 6280911 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia phytofirmans PsJN |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010681 |
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| Strand | + |
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| Start bp | 3973378 |
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| End bp | 3973581 |
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| Gene Length | 204 bp |
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| Protein Length | 67 aa |
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| Translation table | 11 |
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| GC content | 54% |
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| IMG OID | 642623107 |
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| Product | cold-shock DNA-binding domain protein |
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| Protein accession | YP_001897142 |
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| Protein GI | 187925500 |
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| COG category | [K] Transcription |
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| COG ID | [COG1278] Cold shock proteins |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 11 |
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| Plasmid unclonability p-value | 0.00720053 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | decreased coverage |
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| |
Fosmid Coverage information |
| Num covering fosmid clones | 29 |
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| Fosmid unclonability p-value | 0.332876 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGGAAACCG GTACCGTCAA GTGGTTCAAT GACGCAAAGG GCTTTGGCTT CATCACGCCG
GACGGCGGCG GCGAAGATCT GTTCGCGCAT TTCTCGGAAA TCCGCACGGA AGGCTTCAAG
ACGCTGCAAG AAAACCAAAA GGTTACGTTT GAAGTGAAGA CGGGCCCGAA GGGCAAGCAA
GCTGCTAACA TCAAGCCGGT GTAA
|
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| Protein sequence | METGTVKWFN DAKGFGFITP DGGGEDLFAH FSEIRTEGFK TLQENQKVTF EVKTGPKGKQ
AANIKPV
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