Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Bphyt_3521 |
Symbol | hemA |
ID | 6282849 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Burkholderia phytofirmans PsJN |
Kingdom | Bacteria |
Replicon accession | NC_010681 |
Strand | + |
Start bp | 3965834 |
End bp | 3967120 |
Gene Length | 1287 bp |
Protein Length | 428 aa |
Translation table | 11 |
GC content | 64% |
IMG OID | 642623100 |
Product | glutamyl-tRNA reductase |
Protein accession | YP_001897135 |
Protein GI | 187925493 |
COG category | [H] Coenzyme transport and metabolism |
COG ID | [COG0373] Glutamyl-tRNA reductase |
TIGRFAM ID | [TIGR01035] glutamyl-tRNA reductase |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 13 |
Plasmid unclonability p-value | 0.216045 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 27 |
Fosmid unclonability p-value | 0.218753 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGCAGCTTC TAACGATCGG AATCAATCAC CACACTGCGC CTGTCGCCTT GCGCGAACGC GTGGCGTTTC CGCTCGAACA GATCAAGCCC GCATTGGAAA CTTTCAAGAG CATCTGGTTG GGCCCTTCGG CCCGCACAGC GCCGGAAGCG GCGATCCTGT CTACCTGCAA TCGCACCGAA CTCTATTGCG CGACCGACGA CCAGGCCGCG CGCGAGGCCG CGATCCAGTG GCTCTCCAGG TACCACAACC TGCCCATCGA CGAACTCGCG CCGCACGTCT ACGCGCTGCC GCAGTCGGAA GCCGTGCGCC ACGCGTTCCG CGTCGCGTCC GGGCTGGATT CGATGGTGCT GGGCGAAACG CAAATCGTCG GACAAATGAA GGATGCAGTG CGTACCGCAT CCGAAGCCGG CGCGCTCGGC ACGTATTTGA ACCAGCTTTT CCAGCGCACC TTCGCGGTGG CGAAGGAAGT GCGCAGCACG ACCGAAATCG GCGCGCAGTC GGTTTCCATG GCGGCCGCCG CCGTGCGCCT CGCCCAGCGG ATTTTCGACA AGGTCTCGAA CCAGCGCGTG CTGTTCATCG GCGCGGGCGA AATGATCGAG CTGTGCGCCA CGCATTTCGC AGCACAGCAA CCACGTGAAC TCGTGGTCGC GAACCGCACG GCCGAGCGCG GCACGCGTCT CGCCGAGCGC TTCAACGGCC GGGCCATTCC GCTGTCGGAA CTGCCCTCGC GCATGCATGA GTTCGACATC ATCGTGTCGT GTACGGCGTC CACCTTGCCG ATCATCGGCT TGGGCGCCGT CGAGCGGGCT GTCAAAGCGC GCCGTCACCG GCCAATCTTC ATGGTCGATC TGGCCGTGCC GCGCGACATC GAACCCGAAG TCGGTCAGCT CGAAGACGTG TTCCTGTACA CCGTCGACGA CCTCGGCGCG ATCGTCCGCG AGGGCAATGC GTCGCGGCAA GCCGCGGTCG CGCAGGCCGA AGCGATCATC GAAACGCGCG TGCAGAACTT CATGCAATGG CTGGACGCGC GCAGCATCGT GCCGGTGATC CGCCATATGC ACACGCAGGC CGACGTGCTG CGCCGCGCCG AAGTCGAACG CGCGCAGAAA ATGCTCGCGC GCGGCGACGA CCCGGCTGCC GTGCTCGAAG CGCTGTCGCA ATCCCTCACC AATAAACTGA TCCACGGTCC CACGCACGCG CTCAATCGCG CGAGCAGCGA AAACCGAGAC AAGCTCATCG AACTCATGAG CGGTTTCTAC AAACACTCCG GTTCCACGGA GCGTTAG
|
Protein sequence | MQLLTIGINH HTAPVALRER VAFPLEQIKP ALETFKSIWL GPSARTAPEA AILSTCNRTE LYCATDDQAA REAAIQWLSR YHNLPIDELA PHVYALPQSE AVRHAFRVAS GLDSMVLGET QIVGQMKDAV RTASEAGALG TYLNQLFQRT FAVAKEVRST TEIGAQSVSM AAAAVRLAQR IFDKVSNQRV LFIGAGEMIE LCATHFAAQQ PRELVVANRT AERGTRLAER FNGRAIPLSE LPSRMHEFDI IVSCTASTLP IIGLGAVERA VKARRHRPIF MVDLAVPRDI EPEVGQLEDV FLYTVDDLGA IVREGNASRQ AAVAQAEAII ETRVQNFMQW LDARSIVPVI RHMHTQADVL RRAEVERAQK MLARGDDPAA VLEALSQSLT NKLIHGPTHA LNRASSENRD KLIELMSGFY KHSGSTER
|
| |