Gene Bphyt_3507 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBphyt_3507 
Symbol 
ID6282187 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia phytofirmans PsJN 
KingdomBacteria 
Replicon accessionNC_010681 
Strand
Start bp3951636 
End bp3952730 
Gene Length1095 bp 
Protein Length364 aa 
Translation table11 
GC content62% 
IMG OID642623086 
ProductGTP-dependent nucleic acid-binding protein EngD 
Protein accessionYP_001897121 
Protein GI187925479 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG0012] Predicted GTPase, probable translation factor 
TIGRFAM ID[TIGR00092] GTP-binding protein YchF 


Plasmid Coverage information

Num covering plasmid clones13 
Plasmid unclonability p-value0.125034 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones20 
Fosmid unclonability p-value0.0137315 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGCCTCA AATGCGGCAT CGTCGGCCTG CCTAACGTCG GCAAGTCCAC CCTGTTCAAC 
GCGCTGACCA AGGCGGGCAT CGCCGCCGAA AACTATCCGT TCTGCACGAT CGAGCCGAAT
GTCGGCATCG TCGAGGTGCC GGACGCGCGT CTGAAGGCGC TCGCTGAGAT CGTCAAGCCG
GAGCGCATCC TGCCGGCGGT GGTGGAGTTC GTCGACATCG CCGGTCTCGT GGCGGGCGCG
AGCAAGGGCG AAGGTCTGGG CAACCAGTTT CTCGCCAATA TCCGCGAAAC CGATGCGATC
ACGCACGTGG TGCGCTGCTT CGAAGACGAG AACGTGATTC ACGTCGCGAA CAAGATCGAT
CCGCTGTCGG ATATCGAAGT AATCAACACC GAACTGGCGC TGGCCGACCT CGCAACAGTC
GAGAAGGCGC TGGCGCGCTA TTCGAAGGCC GCCAAGTCGG GTAACGACAA GGAAGCCATC
AAGAACGCCG CCGTATTGGA GAAGGTGCGC GCGCAACTCG ACCAGGCCAA GCCGGTCCGC
GCACTCGACC TCTCGGACGA AGAAAAGGCC ACGCTCAAGC CGTTCTGCCT GATCACCGCC
AAGCCGACCA TGTACGTGGC CAATGTGAAG GAAGACGGCT TCGAGAACAA CCCGCATCTG
GATGCGGTCG CGAAGCACGC GGCGGCGGAA AATGCGCCGG TCGTCGCCGT ATGTGCGGCG
ATCGAAGCGG AAATCGCCGA CCTCGACGAA GCCGACATGG AAGTGTTCCT CGCCGACATG
GGCATGGAAG AGCCGGGTCT GAACCGCGTG ATCCGCGCCG GCTTCAAGCT GCTGGGTCTG
CAAACCTACT TCACGGCCGG CGTGAAGGAA GTGCGCGCGT GGACGATCCA TATCGGCGAT
ACGGCGCCGC AGGCCGCGGG CGCGATTCAC ACGGACTTCG AGCGCGGCTT CATTCGCGCG
CAGACGATCG CGTACAACGA CTACATCACT TACAAGGGTG AGCAAGGCGC GAAGGAAGCC
GGCAAGATGC GCGCGGAAGG CAAGGAATAC GTCGTGCATG ATGGCGACGT GATGAACTTC
CTGTTCAACG TCTGA
 
Protein sequence
MSLKCGIVGL PNVGKSTLFN ALTKAGIAAE NYPFCTIEPN VGIVEVPDAR LKALAEIVKP 
ERILPAVVEF VDIAGLVAGA SKGEGLGNQF LANIRETDAI THVVRCFEDE NVIHVANKID
PLSDIEVINT ELALADLATV EKALARYSKA AKSGNDKEAI KNAAVLEKVR AQLDQAKPVR
ALDLSDEEKA TLKPFCLITA KPTMYVANVK EDGFENNPHL DAVAKHAAAE NAPVVAVCAA
IEAEIADLDE ADMEVFLADM GMEEPGLNRV IRAGFKLLGL QTYFTAGVKE VRAWTIHIGD
TAPQAAGAIH TDFERGFIRA QTIAYNDYIT YKGEQGAKEA GKMRAEGKEY VVHDGDVMNF
LFNV