Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Bphyt_3487 |
Symbol | |
ID | 6282639 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Burkholderia phytofirmans PsJN |
Kingdom | Bacteria |
Replicon accession | NC_010681 |
Strand | + |
Start bp | 3932532 |
End bp | 3933734 |
Gene Length | 1203 bp |
Protein Length | 400 aa |
Translation table | 11 |
GC content | 65% |
IMG OID | 642623066 |
Product | beta-ketoadipyl CoA thiolase |
Protein accession | YP_001897101 |
Protein GI | 187925459 |
COG category | [I] Lipid transport and metabolism |
COG ID | [COG0183] Acetyl-CoA acetyltransferase |
TIGRFAM ID | [TIGR01930] acetyl-CoA acetyltransferases [TIGR02430] beta-ketoadipyl CoA thiolase |
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Plasmid Coverage information |
Num covering plasmid clones | 7 |
Plasmid unclonability p-value | 0.00319846 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
Num covering fosmid clones | 14 |
Fosmid unclonability p-value | 0.000297737 |
Fosmid Hitchhiker | Yes |
Fosmid clonability | hitchhiker |
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Sequence |
Gene sequence | ATGAACGACG CCTTCATTTG CGATGCGATT CGCACTCCAA TTGGCCGCTA TGGCGGCGCA CTCAAGGATG TCCGCGCCGA CGACCTCGGC GCGGTGCCGA TCAAGGCGCT GATCGAACGC AATCCTGGCG TCGACTGGCG CACTGTAGAC GATGTCATTT ATGGCTGCGC GAATCAGGCC GGCGAAGACA ATCGCAACGT CGCCCGTATG TCGGCGTTGC TGGCCGGCTT GCCTGTTGAG GCGCCCGGCT CAACCATCAA CCGCTTGTGC GGCTCGGGTA TGGACGCGGT CGGCACCGCC GCGCGCGCGA TCAAGGCGGG CGAGGCGCGC CTGATGATCG CCGGCGGCGT CGAAAGCATG ACACGCGCGC CGTTTGTCAT GGGCAAGGCG ACTAGTGCGT TCGCGCGCCA GGCTGATATC TACGACACGA CCATCGGCTG GCGCTTCATC AACCCGCTGA TGAAACGCCA GTATGGCGTC GATTCGATGC CTGAAACCGC GGAAAACGTC GCTGCCGAAT TCAGCGTCAG CCGCGCGGAT CAGGACGCGT TCGCGCTGGC GAGCCAGCAA AAGGCCGCTC GCGCCCAGCA GGATGGCACG CTGGCCCAAG AGATTGTCGG CGTCGAAATC GCGCAGAAAA AGGGCGACCC CGTGCGCGCG CTGCTCGATG AGCACCCGCG CGAAACGTCG CTCGAAAGTT TGGGCAAGCT TAAAGGCGTG GTTCGCCCGG ACGGCAGCGT GACGGCCGGC AATGCGTCGG GCGTGAACGA CGGCGCGTGC GCGCTGTTGC TAGCCAACCA GCAGGCGGCC GATCAATACG GCCTGCGCCG CCGTGCCCGC GTGGTGGGCA TGGCAACGGC GGGAGTCGAG CCGCGCATCA TGGGTATCGG TCCGGCGCCG GCCACGCAAA AACTGTTGAA GCAACTCGGC ATGACGCTCG AACAACTCGA TGTGATCGAG TTGAACGAAG CCTTCGCATC GCAAGGTCTC GCTGTTCTGC GTACGCTCGG TTTGCGCGAC GACGACCCGC GCGTCAACCC GAACGGCGGA GCCATTGCAC TCGGCCATCC GCTGGGTGCT TCGGGCGCGC GTCTGATCAC GACCGCGCTG TACCAATTGG AGCGGACCAA CGGCCGCTTT GCGCTTTGCA CGATGTGCAT TGGCGTGGGC CAGGGCATTG CACTGGTCAT CGAGCGGCTC TGA
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Protein sequence | MNDAFICDAI RTPIGRYGGA LKDVRADDLG AVPIKALIER NPGVDWRTVD DVIYGCANQA GEDNRNVARM SALLAGLPVE APGSTINRLC GSGMDAVGTA ARAIKAGEAR LMIAGGVESM TRAPFVMGKA TSAFARQADI YDTTIGWRFI NPLMKRQYGV DSMPETAENV AAEFSVSRAD QDAFALASQQ KAARAQQDGT LAQEIVGVEI AQKKGDPVRA LLDEHPRETS LESLGKLKGV VRPDGSVTAG NASGVNDGAC ALLLANQQAA DQYGLRRRAR VVGMATAGVE PRIMGIGPAP ATQKLLKQLG MTLEQLDVIE LNEAFASQGL AVLRTLGLRD DDPRVNPNGG AIALGHPLGA SGARLITTAL YQLERTNGRF ALCTMCIGVG QGIALVIERL
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