| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bphyt_3463 |
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| Symbol | lpxC |
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| ID | 6280854 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia phytofirmans PsJN |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010681 |
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| Strand | - |
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| Start bp | 3896303 |
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| End bp | 3897220 |
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| Gene Length | 918 bp |
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| Protein Length | 305 aa |
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| Translation table | 11 |
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| GC content | 59% |
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| IMG OID | 642623037 |
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| Product | UDP-3-O-[3-hydroxymyristoyl] N-acetylglucosamine deacetylase |
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| Protein accession | YP_001897077 |
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| Protein GI | 187925435 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG0774] UDP-3-O-acyl-N-acetylglucosamine deacetylase |
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| TIGRFAM ID | [TIGR00325] UDP-3-0-acyl N-acetylglucosamine deacetylase |
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Plasmid Coverage information |
| Num covering plasmid clones | 6 |
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| Plasmid unclonability p-value | 0.0003199 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | 14 |
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| Fosmid unclonability p-value | 0.000399265 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | ATGCTGAAGC AGCGCACTAT CAAACAAATC GTCAAGACGG TCGGCATCGG CCTGCACTCG
GGCCGCAAAG TCGAACTGAC GCTCCGTCCG GCCGCGCCGG ACACGGGCAT CGTGTTTTCG
CGCGTGGATC TGGCCACGCC GGTGGACATT CCCGCGTCGG CGATGGCGAT TGGCGATACG
CGTATGGCTT CCGTGTTGCA GAAGGACGGC GCGCGCGTCT CGACCATCGA GCATCTGATG
TCCGCCTGCG CCGGTCTCGG CATCGACAAT CTTTATATCG ACGTCACCGC CGAAGAAATT
CCGATCATGG ACGGCAGCGC CGGTTCATTC GTATTTCTGA TTCAGTCTGC CGGTATTGAA
GAGCAGAACG CGGCGAAGAA ATTCATCAAG GTCACCAAGC CGGTCGAAAT TCGCGACGGC
GATAAATTCG CGCGCCTCGA CCCGTATTTT GGTTTCAAGC TCAAATTTAC GATCGATTTC
CGTCACCCGG CTGTGGATAA AACCGGTCAG GCGCTGGAAG TGGATTTTGC CAATACGTCG
TACGTGCGCG AGATCGCGCG TGCTCGCACC TTCGGTTTTG CGCATGAGGT GGAAATGATG
CGCGAACTGG GTCTGGCGCG TGGCGGCAGC ATGGACAACG CGATCGTGCT GGACGAATAC
CGCATTCTGA ACAACGACGG CCTGCGCTAC GACGACGAGT TCGTGAAGCA CAAGATGCTC
GACGCGATCG GCGACCTGTA TGTGATCGGC CATCCGCTGC TGGCAGCGTA CGACGCGTAC
AAATCGGGCC ACGGCCTGAA CAACGCGCTG CTGCGCGAAC TGCTGGCGCA CGAAGATTCG
TACGAAATCG TCACCTTCGA CGACACGCAA AAGGCGCCGC GCGGTTTTGC CTACGAGACG
CAGACGGCTT TTGCCTAA
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| Protein sequence | MLKQRTIKQI VKTVGIGLHS GRKVELTLRP AAPDTGIVFS RVDLATPVDI PASAMAIGDT
RMASVLQKDG ARVSTIEHLM SACAGLGIDN LYIDVTAEEI PIMDGSAGSF VFLIQSAGIE
EQNAAKKFIK VTKPVEIRDG DKFARLDPYF GFKLKFTIDF RHPAVDKTGQ ALEVDFANTS
YVREIARART FGFAHEVEMM RELGLARGGS MDNAIVLDEY RILNNDGLRY DDEFVKHKML
DAIGDLYVIG HPLLAAYDAY KSGHGLNNAL LRELLAHEDS YEIVTFDDTQ KAPRGFAYET
QTAFA
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