| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bphyt_3461 |
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| Symbol | |
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| ID | 6284771 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia phytofirmans PsJN |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010681 |
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| Strand | - |
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| Start bp | 3892645 |
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| End bp | 3895455 |
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| Gene Length | 2811 bp |
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| Protein Length | 936 aa |
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| Translation table | 11 |
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| GC content | 62% |
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| IMG OID | 642623035 |
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| Product | preprotein translocase subunit SecA |
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| Protein accession | YP_001897075 |
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| Protein GI | 187925433 |
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| COG category | [U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG0653] Preprotein translocase subunit SecA (ATPase, RNA helicase) |
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| TIGRFAM ID | [TIGR00963] preprotein translocase, SecA subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | 7 |
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| Plasmid unclonability p-value | 0.126577 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 12 |
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| Fosmid unclonability p-value | 0.000173777 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | decreased coverage |
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Sequence |
| Gene sequence | ATGACCACCG GTTTTCTACA GAAGATTTTT GGCAGCCGCA ACCAGCGGCT AGTCAAGCAA
TATCAAAAGA CCGTCACGGC GATCAATGCG CTCGAGCCGC AGATCGAGCA ATTGACGGAC
GATCAACTGC GCGCCAAAAC GGGTGAATTC CGCCAGCGCG TCGCGAGCGG CGAATCGCTC
GACAAGCTCC TGCCGGAAGC CTTCGCGGTG TGCCGCGAGG CCAGCAAGCG GGTGCTGAAA
ATGCGCCATT TCGACGTGCA GCTGATCGGC GGCATGGTTC TGCACTACGG CAAGATCGGC
GAAATGCGCA CCGGCGAGGG CAAGACGCTT GTCGCTACGC TGCCGGTGTA CCTGAACGCG
CTGTCGGGCC GCGGCGTGCA CGTGGTCACG GTCAACGACT ACCTCGCCCA GCGCGACGCC
GAGTGGATGG CGCGCCTGTA CAACTTCCTC GGTCTGTCCG TCGGCATCAA CCTGTCGCAG
ATGGATCACG GCGCGAAGCA GGAAGCCTAC GCGGCGGACA TCACATACGG CACCAACAAC
GAATTCGGCT TCGACTACCT GCGCGACAAC ATGGTCTACG AGACCGACGC GCGCGTGCAG
CGAGCCCTGA ATTTCGCGGT GGTCGACGAG GTCGACTCGA TCCTGATCGA CGAAGCCCGT
ACGCCGCTGA TCATCTCCGG CCAGGCCGAA GATCACACCG ACCTGTACGT GCGCATGAAC
GCGCTGCCGC CGCTGCTCGA ACGCCAGATC GGTGAAGAGA AAGCGGACGG CACCGGCGTC
GAGAGGCCGG GCGACTACAC GCTGGACGAA AAAGGCCGCC AGGTGTTCCT GACGGAATCG
GGCCACGAAA AGGCCGAGCG CCTGCTCGCC GAGTGGGGCC TGATCGGCGA GGGCGAAAGC
CTGTACGCGC CGCAGAACAT CACGTTGATG CACCACGTGT ACGCCGCGCT GCGCGCACAC
ACGCTGTTCT TCAAAGACCA GCATTACGTG GTGCAGAACG GCGAAGTGGT GATCGTCGAC
GAATTCACCG GCCGTCTGAT GTCAGGCCGC CGCTGGTCGG ACGGTCTGCA CCAGGCTGTC
GAGGCGAAGG AACACGTCAA GATCCAGAGC GAGAACCAGA CGCTCGCGTC GATCACGTTC
CAGAACTACT TCCGCATGTA CGCGAAGCTG TCCGGCATGA CCGGCACGGC GGATACGGAA
GCGTTCGAAT TCAACGAGAT CTATGGTCTC GAAACGGTCG TGATCCCGAC CAATCGTCCG
CCCAAGCGGA TCGACAAGCA GGATCAGATC TACAAGACCG CCAAGGAACG TTACGACGCG
GTGATTCGCG ACATCCGCGA TTGCTACGAG CGCGGTCAGC CGGTGCTGGT CGGCACGACG
TCGATCGAAA ATTCCGAGTT GCTGTCGCAT CTGCTGAAGC AGGCCGGTTT GCCGCACGAA
GTGCTGAATG CCAAGCAGCA TGCGCGTGAA GCCGAGATCG TCGCTGAAGC CGGCCGTCCG
AAGCGTGTCA CTATCGCCAC CAACATGGCC GGTCGCGGTA CCGACATCGT GCTCGGTGGC
AATGCCGAAA AGCAAGCGTC CTTCATCGAA AAGGACGAAA CGCTTTCCGA AGAAGAGAAA
CAACGCCGCA TCCAGAAGCT GCACGACGAA TGGCAAGCGC TGCACGATCA GGTGAAGGCC
GCGGGCGGTC TGCACATCAT CGGCACCGAG CGCCACGAAT CGCGCCGGAT CGACAACCAG
TTGCGCGGCC GTGCCGGCCG TCAGGGTGAC CCGGGTTCGT CGCGCTTCTA TCTGTCGCTT
GAAGATCCGC TGCTGCGCAT TTTCGCCGGC GATCGCGTGC GCGCGATCAT GGACCGGCTG
AAGATGCCGG AAGGCGAAGC GATCGAAGCG GGCATCGTGT CGCGCTCGAT CGAATCGGCG
CAGCGTAAAG TGGAAGCGCG CAACTTCGAC GTTCGCAAGC AATTGCTCGA ATACGACGAT
GTCTCGAACG ATCAGCGCAA GGTGATCTAC CAGCAGCGCA ACGAATTGCT CGAAGCGAAC
GACATCACCG AAACGATCGG CGCGATGCGC CAGAGCGTGA TCGGCGAAAT CGTTCACCAG
TTCGTGCCGG TGGGCAGCAT TGAAGAGCAG TGGGACGTGC CCGAACTGGA AGAAGTGCTG
CGCAACGAAT GGCAGCTCGA TCTCGCGATC CAGGAAATGA TCAACGAGTC GAACTCGATC
AGCGCGGACG AGATTCTCGA GGCGGTCGAG GCCGCCGCGG ACGAAGCCTA CGAAGCGAAG
GTCGAGCTGG TCGGCCGCGA ATCGTTCAGC GCGTTCGAAC GCTCGATCAT GCTGCAAACG
CTGGACCGTA GCTGGCGCGA ACATCTGGCC GCGCTCGATC ACTTGCGTCA GGGCATCCAT
CTGCGCGGCT ATGCGCAGAA GAATCCGAAG CAGGAATACA AGCGCGAGGC GTTCGAACTA
TTCGCCGCCA TGCTCGACGC CGTGAAGCTT GAAGTCACCC GCGTGGTGAT GAACGTGCAG
ATCCAGTCGC CGGAACAGTT GGAACAGGCT GCCGAACAGC TCGAAGAGCA AGGCGGTCAC
CTTGAAAACG TCGAGTTCCG CCACGCCGAA TTCGCCGAAG CAGCCGCCGC AGCGCCTGTT
GCCGCGGAAG CAGCCACTGC CGCCATGATT GGCGATGCAA TGAGCCACGG CTCGTCGCAT
ACGGCAGCAG CGAACCTGAG CGCGGACAAC GTGCCGAAGG TTGGCCGCAA CGACCCGTGC
CCGTGCGGCA GCGGCAAGAA GTACAAGCAG TGCCACGGCA AGATCGTCTA A
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| Protein sequence | MTTGFLQKIF GSRNQRLVKQ YQKTVTAINA LEPQIEQLTD DQLRAKTGEF RQRVASGESL
DKLLPEAFAV CREASKRVLK MRHFDVQLIG GMVLHYGKIG EMRTGEGKTL VATLPVYLNA
LSGRGVHVVT VNDYLAQRDA EWMARLYNFL GLSVGINLSQ MDHGAKQEAY AADITYGTNN
EFGFDYLRDN MVYETDARVQ RALNFAVVDE VDSILIDEAR TPLIISGQAE DHTDLYVRMN
ALPPLLERQI GEEKADGTGV ERPGDYTLDE KGRQVFLTES GHEKAERLLA EWGLIGEGES
LYAPQNITLM HHVYAALRAH TLFFKDQHYV VQNGEVVIVD EFTGRLMSGR RWSDGLHQAV
EAKEHVKIQS ENQTLASITF QNYFRMYAKL SGMTGTADTE AFEFNEIYGL ETVVIPTNRP
PKRIDKQDQI YKTAKERYDA VIRDIRDCYE RGQPVLVGTT SIENSELLSH LLKQAGLPHE
VLNAKQHARE AEIVAEAGRP KRVTIATNMA GRGTDIVLGG NAEKQASFIE KDETLSEEEK
QRRIQKLHDE WQALHDQVKA AGGLHIIGTE RHESRRIDNQ LRGRAGRQGD PGSSRFYLSL
EDPLLRIFAG DRVRAIMDRL KMPEGEAIEA GIVSRSIESA QRKVEARNFD VRKQLLEYDD
VSNDQRKVIY QQRNELLEAN DITETIGAMR QSVIGEIVHQ FVPVGSIEEQ WDVPELEEVL
RNEWQLDLAI QEMINESNSI SADEILEAVE AAADEAYEAK VELVGRESFS AFERSIMLQT
LDRSWREHLA ALDHLRQGIH LRGYAQKNPK QEYKREAFEL FAAMLDAVKL EVTRVVMNVQ
IQSPEQLEQA AEQLEEQGGH LENVEFRHAE FAEAAAAAPV AAEAATAAMI GDAMSHGSSH
TAAANLSADN VPKVGRNDPC PCGSGKKYKQ CHGKIV
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