| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bphyt_3449 |
|---|
| Symbol | rplU |
|---|
| ID | 6283955 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Burkholderia phytofirmans PsJN |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010681 |
|---|
| Strand | - |
|---|
| Start bp | 3881042 |
|---|
| End bp | 3881353 |
|---|
| Gene Length | 312 bp |
|---|
| Protein Length | 103 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 54% |
|---|
| IMG OID | 642623022 |
|---|
| Product | 50S ribosomal protein L21 |
|---|
| Protein accession | YP_001897063 |
|---|
| Protein GI | 187925421 |
|---|
| COG category | [J] Translation, ribosomal structure and biogenesis |
|---|
| COG ID | [COG0261] Ribosomal protein L21 |
|---|
| TIGRFAM ID | [TIGR00061] ribosomal protein L21 |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 11 |
|---|
| Plasmid unclonability p-value | 0.00752607 |
|---|
| Plasmid hitchhiking | Yes |
|---|
| Plasmid clonability | hitchhiker |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 18 |
|---|
| Fosmid unclonability p-value | 0.00404832 |
|---|
| Fosmid Hitchhiker | Yes |
|---|
| Fosmid clonability | hitchhiker |
|---|
| |
Sequence |
| Gene sequence | ATGTACGCGG TCATAAAAAC CGGTGGCAAG CAGTATAAAG TTGCCGTCGG CGAAAAACTT
AAAGTAGAAC AGATACCGGC AGACATTGAC GCTGAAATCA CGCTCGACCA GGTTCTCGCA
GTGGGCGAAG GCGAATCGAT TAAGTTCGGT ACGCCGCTGG TCAGTGGGGC TTCCGTCAAG
GCTACCGTCG TGTCGCAAGG TCGTCACGCA AAAGTGACCA TCTTCAAGAT GCGTCGCCGG
AAGCACTACC AGAAGCATGG CGGCCACCGC CAGAACTATA CCGAACTGCG CATCGACGCG
ATCAACGCGT AA
|
|---|
| Protein sequence | MYAVIKTGGK QYKVAVGEKL KVEQIPADID AEITLDQVLA VGEGESIKFG TPLVSGASVK
ATVVSQGRHA KVTIFKMRRR KHYQKHGGHR QNYTELRIDA INA
|
|---|
| |