| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bphyt_3448 |
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| Symbol | rpmA |
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| ID | 6283954 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia phytofirmans PsJN |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010681 |
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| Strand | - |
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| Start bp | 3880753 |
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| End bp | 3881016 |
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| Gene Length | 264 bp |
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| Protein Length | 87 aa |
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| Translation table | 11 |
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| GC content | 60% |
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| IMG OID | 642623021 |
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| Product | 50S ribosomal protein L27 |
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| Protein accession | YP_001897062 |
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| Protein GI | 187925420 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0211] Ribosomal protein L27 |
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| TIGRFAM ID | [TIGR00062] ribosomal protein L27 |
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Plasmid Coverage information |
| Num covering plasmid clones | 13 |
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| Plasmid unclonability p-value | 0.0232252 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 19 |
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| Fosmid unclonability p-value | 0.00744788 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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| |
Sequence |
| Gene sequence | ATGGCACACA AAAAGGCAGG CGGATCATCC CGCAACGGCC GCGACTCCGA ATCGAAACGC
CTTGGCGTGA AGGTTTACGG CGGTCAGGCT ATCAACGCTG GCGGCATCAT CGTTCGTCAA
CGTGGCACGC GTATGCACCC GGGCGAAAAC GTTGGCATCG GCAAGGATCA CACCTTGTTC
GCGCTGACGG ACGGCCACGT CAATTTCTCG ACGAAGGGCG CAGCGAAGAA GCACATGGTC
AACGTCGTCC CGGCAGCAGT CTGA
|
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| Protein sequence | MAHKKAGGSS RNGRDSESKR LGVKVYGGQA INAGGIIVRQ RGTRMHPGEN VGIGKDHTLF
ALTDGHVNFS TKGAAKKHMV NVVPAAV
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