Gene Bphyt_3447 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBphyt_3447 
SymbolobgE 
ID6283953 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia phytofirmans PsJN 
KingdomBacteria 
Replicon accessionNC_010681 
Strand
Start bp3879388 
End bp3880509 
Gene Length1122 bp 
Protein Length373 aa 
Translation table11 
GC content64% 
IMG OID642623020 
ProductGTPase ObgE 
Protein accessionYP_001897061 
Protein GI187925419 
COG category[R] General function prediction only 
COG ID[COG0536] Predicted GTPase 
TIGRFAM ID[TIGR00231] small GTP-binding protein domain
[TIGR02729] Obg family GTPase CgtA 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value0.179081 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones18 
Fosmid unclonability p-value0.00548922 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
ATGAAGTTCA TTGACGAAGC GAGGATTGAA GTCATCGCCG GCGACGGAGG GGATGGCAGC 
GCGTCGATGC GCCGCGAGAA GTTCGTTCCG TTCGGCGGCC CGGATGGCGG CGACGGCGGT
CGGGGCGGCA GCGTGATCGC GGTCGCGGAC CGCAACATCA ACACGCTGAT CGACTACCGC
TACGCGAAGA AACACCTGGC GCGCAACGGC GAAAACGGCC GCGGCGCGGA CTGCTACGGC
AAAGGCGGCG ACGACATTAC GTTGCGTATG CCGGTCGGCA CCACGATCAC CGACATGGAG
ACCGGCGAAC TGATCGCCGA TCTTACCGAG CACAACCAGA GCGTGCAGAT CGCTCAGGGT
GGCGCGGGCG GTCTCGGTAA CCTGCATTTC AAATCCAGTA CGAACCGCGC GCCCCGTCAG
AAAACGGACG GCAAGCCGGG CGAACGCCGC ATGGTGCGCC TTGAGCTGAA GGTGCTGGCG
GACGTCGGCC TGCTCGGCAT GCCGAACGCC GGCAAGTCGA CTTTCATCGC GTCGGTGTCG
AACGCGAAAC CGAAGATCGC AGACTACCCG TTCACGACGC TCGCGCCGAA TCTCGGTGTG
GTGCGTGTCG GGCCGAGCCG CAGCTTCGTG ATCGCCGACA TTCCTGGCTT GATTGAAGGC
GCGGCGGAAG GCGCGGGCCT CGGCCACCAG TTCCTGCGTC ACTTGCAGCG CACGGGCTTG
TTGTTGCATA TCGTCGACCT CGCACCGTTC GACGACGCGG TCGATCCGGT CGCGGAAGCC
AAGGCGATCG TCAACGAACT GCGCAAGTAC GACGAGCTGC TGTATGAAAA GCCGCGCTGG
CTGGTGCTGA ACAAGCTGGA CATGGTGCCC GAAGACGAGC GCGAAGCGCG TGTCTCGGCG
TTCCTCGAAG GCTTCGGCTG GGATGGTCCG GTGTTCGAAA TCTCGGCGCT GACTGGCCAA
GGCTGCGAAA ACCTTTGCTA CGCGGTGTTC GACCACATCT CCGCGCATTC TGACGCGCAG
CGTGCGGCGG AAGCCGAAGA TCTCGCTGCG GACGTGCGCT TCCGCGAGAA GCCGCAAGCC
CCTGCTGCCG CAGACGACGC CGGCACCGAC CCGCAGGTAT AA
 
Protein sequence
MKFIDEARIE VIAGDGGDGS ASMRREKFVP FGGPDGGDGG RGGSVIAVAD RNINTLIDYR 
YAKKHLARNG ENGRGADCYG KGGDDITLRM PVGTTITDME TGELIADLTE HNQSVQIAQG
GAGGLGNLHF KSSTNRAPRQ KTDGKPGERR MVRLELKVLA DVGLLGMPNA GKSTFIASVS
NAKPKIADYP FTTLAPNLGV VRVGPSRSFV IADIPGLIEG AAEGAGLGHQ FLRHLQRTGL
LLHIVDLAPF DDAVDPVAEA KAIVNELRKY DELLYEKPRW LVLNKLDMVP EDEREARVSA
FLEGFGWDGP VFEISALTGQ GCENLCYAVF DHISAHSDAQ RAAEAEDLAA DVRFREKPQA
PAAADDAGTD PQV