Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Bphyt_3447 |
Symbol | obgE |
ID | 6283953 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Burkholderia phytofirmans PsJN |
Kingdom | Bacteria |
Replicon accession | NC_010681 |
Strand | - |
Start bp | 3879388 |
End bp | 3880509 |
Gene Length | 1122 bp |
Protein Length | 373 aa |
Translation table | 11 |
GC content | 64% |
IMG OID | 642623020 |
Product | GTPase ObgE |
Protein accession | YP_001897061 |
Protein GI | 187925419 |
COG category | [R] General function prediction only |
COG ID | [COG0536] Predicted GTPase |
TIGRFAM ID | [TIGR00231] small GTP-binding protein domain [TIGR02729] Obg family GTPase CgtA |
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Plasmid Coverage information |
Num covering plasmid clones | 14 |
Plasmid unclonability p-value | 0.179081 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 18 |
Fosmid unclonability p-value | 0.00548922 |
Fosmid Hitchhiker | Yes |
Fosmid clonability | hitchhiker |
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Sequence |
Gene sequence | ATGAAGTTCA TTGACGAAGC GAGGATTGAA GTCATCGCCG GCGACGGAGG GGATGGCAGC GCGTCGATGC GCCGCGAGAA GTTCGTTCCG TTCGGCGGCC CGGATGGCGG CGACGGCGGT CGGGGCGGCA GCGTGATCGC GGTCGCGGAC CGCAACATCA ACACGCTGAT CGACTACCGC TACGCGAAGA AACACCTGGC GCGCAACGGC GAAAACGGCC GCGGCGCGGA CTGCTACGGC AAAGGCGGCG ACGACATTAC GTTGCGTATG CCGGTCGGCA CCACGATCAC CGACATGGAG ACCGGCGAAC TGATCGCCGA TCTTACCGAG CACAACCAGA GCGTGCAGAT CGCTCAGGGT GGCGCGGGCG GTCTCGGTAA CCTGCATTTC AAATCCAGTA CGAACCGCGC GCCCCGTCAG AAAACGGACG GCAAGCCGGG CGAACGCCGC ATGGTGCGCC TTGAGCTGAA GGTGCTGGCG GACGTCGGCC TGCTCGGCAT GCCGAACGCC GGCAAGTCGA CTTTCATCGC GTCGGTGTCG AACGCGAAAC CGAAGATCGC AGACTACCCG TTCACGACGC TCGCGCCGAA TCTCGGTGTG GTGCGTGTCG GGCCGAGCCG CAGCTTCGTG ATCGCCGACA TTCCTGGCTT GATTGAAGGC GCGGCGGAAG GCGCGGGCCT CGGCCACCAG TTCCTGCGTC ACTTGCAGCG CACGGGCTTG TTGTTGCATA TCGTCGACCT CGCACCGTTC GACGACGCGG TCGATCCGGT CGCGGAAGCC AAGGCGATCG TCAACGAACT GCGCAAGTAC GACGAGCTGC TGTATGAAAA GCCGCGCTGG CTGGTGCTGA ACAAGCTGGA CATGGTGCCC GAAGACGAGC GCGAAGCGCG TGTCTCGGCG TTCCTCGAAG GCTTCGGCTG GGATGGTCCG GTGTTCGAAA TCTCGGCGCT GACTGGCCAA GGCTGCGAAA ACCTTTGCTA CGCGGTGTTC GACCACATCT CCGCGCATTC TGACGCGCAG CGTGCGGCGG AAGCCGAAGA TCTCGCTGCG GACGTGCGCT TCCGCGAGAA GCCGCAAGCC CCTGCTGCCG CAGACGACGC CGGCACCGAC CCGCAGGTAT AA
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Protein sequence | MKFIDEARIE VIAGDGGDGS ASMRREKFVP FGGPDGGDGG RGGSVIAVAD RNINTLIDYR YAKKHLARNG ENGRGADCYG KGGDDITLRM PVGTTITDME TGELIADLTE HNQSVQIAQG GAGGLGNLHF KSSTNRAPRQ KTDGKPGERR MVRLELKVLA DVGLLGMPNA GKSTFIASVS NAKPKIADYP FTTLAPNLGV VRVGPSRSFV IADIPGLIEG AAEGAGLGHQ FLRHLQRTGL LLHIVDLAPF DDAVDPVAEA KAIVNELRKY DELLYEKPRW LVLNKLDMVP EDEREARVSA FLEGFGWDGP VFEISALTGQ GCENLCYAVF DHISAHSDAQ RAAEAEDLAA DVRFREKPQA PAAADDAGTD PQV
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