Gene Bphyt_3414 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBphyt_3414 
Symbol 
ID6281605 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia phytofirmans PsJN 
KingdomBacteria 
Replicon accessionNC_010681 
Strand
Start bp3843047 
End bp3844099 
Gene Length1053 bp 
Protein Length350 aa 
Translation table11 
GC content68% 
IMG OID642622987 
Product2-keto-3-deoxy-galactonokinase 
Protein accessionYP_001897028 
Protein GI187925386 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG3734] 2-keto-3-deoxy-galactonokinase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value0.302272 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones28 
Fosmid unclonability p-value0.341449 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAGCGAG CGGGTTCTCC CACCCAGGCG GCCGGCCATG CCGCAGCCGT TGCGGTCGAC 
GCGAGCCACG AGCACGCCGC GCTGATCGCC CTCGACTGGG GCACGACGTC GCTGCGCGCC
TATCTGTACG ACGCGTCCGG CAACGTGCTG GCGACGCGCG CATCGACGGC GGGCATCATG
AATCTGCCGC GCAGCGCGGA GCAGGGCGGC TTCGACGCGG CCTTCGACGA CACTTGCGGC
GCCTGGCTCG CACACGCGCC CGCCGCGCCG GTGATCGCGG CAGGCATGGT CGGCAGCGCG
CAAGGCTGGC TGGAAGCGCC GTACGTGGAC ACGCCGGCAA GCGCCGATGC ACTGGTGGCC
GGCATCGTCC GCGTAAAGGC GGCGTGCGGC GTGACGCTGC ATATCGTGCC GGGCGTCCTG
CAACGCGGCG AATTGCCCAA CGTCATGCGC GGCGAAGAAA CGCAAATCTT CGGTGCACTC
GGCGAAGAAA CCAACACCGC CGACAGCGGC AAGCGCTCGT TGATCGGCCT CCCCGGCACC
CACGCGAAAT GGGCGGTGGT GCAGGCGGAC CGCATCGAAC GTTTTCATAC CTTCATGACC
GGCGAAGTAT TTGCGGCACT GCGCGAACAC ACGATCCTCG GCCGCACGAT GCTGACGCCC
GATAGCCCGG ACACCAGCGC CTTCCTGCAT GGCGTGAACA TCGCGCGGGA AAAAGGCCAG
GCGGGTGTCC TCGCGACCGT GTTCAGTTCG CGCACGCTCG GCCTCACCGG ACAACTTTCG
CGCGAACAGC AGCCCGACTA TTTGTCGGGA TTGCTGATCG GCCACGAACT CGCCGGCCTC
GACGCCGTGC TTGCACAACA GCAAAGCGCG CTCGCCGGGC AGAGCCTGCG CCTGATCGGC
AACGAAGCGC TGTGCGAGCG TTATCGGCTC GCGCTCGCGC AATTCGGCTG CACCCAGGCG
GAACTGGTCA AGCACGCCAC CGAGCGCGGC CTGTGGCGCG TGGCGTCGCA GGCAGGGCTC
GTCAAACCGG CCGCCAAGAC GGCGCGCGCC TGA
 
Protein sequence
MKRAGSPTQA AGHAAAVAVD ASHEHAALIA LDWGTTSLRA YLYDASGNVL ATRASTAGIM 
NLPRSAEQGG FDAAFDDTCG AWLAHAPAAP VIAAGMVGSA QGWLEAPYVD TPASADALVA
GIVRVKAACG VTLHIVPGVL QRGELPNVMR GEETQIFGAL GEETNTADSG KRSLIGLPGT
HAKWAVVQAD RIERFHTFMT GEVFAALREH TILGRTMLTP DSPDTSAFLH GVNIAREKGQ
AGVLATVFSS RTLGLTGQLS REQQPDYLSG LLIGHELAGL DAVLAQQQSA LAGQSLRLIG
NEALCERYRL ALAQFGCTQA ELVKHATERG LWRVASQAGL VKPAAKTARA