| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bphyt_3410 |
|---|
| Symbol | araG |
|---|
| ID | 6281601 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Burkholderia phytofirmans PsJN |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010681 |
|---|
| Strand | - |
|---|
| Start bp | 3838756 |
|---|
| End bp | 3840294 |
|---|
| Gene Length | 1539 bp |
|---|
| Protein Length | 512 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 63% |
|---|
| IMG OID | 642622983 |
|---|
| Product | L-arabinose transporter ATP-binding protein |
|---|
| Protein accession | YP_001897024 |
|---|
| Protein GI | 187925382 |
|---|
| COG category | [G] Carbohydrate transport and metabolism |
|---|
| COG ID | [COG1129] ABC-type sugar transport system, ATPase component |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 10 |
|---|
| Plasmid unclonability p-value | 0.0659281 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 25 |
|---|
| Fosmid unclonability p-value | 0.140224 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | GTGTCAGCGA CGCTACGTTT TGACAATATC GGCAAAGTCT TTCCAGGCGT GCGCGCGCTC
GACGGTGTGT CCTTCGACGT CAACGTCGGC CAGGTGCACG GCCTGATGGG CGAAAACGGC
GCGGGGAAAT CGACCCTGCT GAAGATTCTC GGTGGTGAAT ATCAGCCCGA CTCGGGCCGC
GTGATGATCG ACGGCAACGA GGTGCGCTTC ACGAGCGCGG CGTCGTCGAT CGCGGCGGGC
ATCGCGGTGA TTCACCAGGA ACTGCAATAC GTGCCCGATC TGACGGTCGC GGAAAATCTG
CTGCTCGGAC AACTGCCGAA CTCGCTCGGC TGGGTCAACA AGCGCGAAGC CAAACGCTTC
GTGCGCGAAC GCCTCGAAGC GATGGGCGTC GCGCTCGACC CGAACGCGAA ACTGCGCAAG
CTCTCGATCG CGCAGCGCCA GATGGTGGAA ATCTGCAAGG CGCTGCTGCG TAACGCGCGC
GTGATCGCTC TGGACGAGCC GACCAGCTCG CTGTCGCATC GTGAGACCGA AGTGCTGTTC
AAGCTGGTGC GCGACTTGCG CGCCGACAAT CGCGCGATGA TCTACATCTC GCACCGCATG
GACGAGATCT ACGAGTTGTG CGACGCCTGC ACGATCTTCC GCGACGGCCG CAAGATCGCC
TCGCATCCCA CGCTCGAAGG CGTGACGCGC GACACCATCG TCAGCGAGAT GGTGGGGCGG
GAAATTTCGG ATATCTATAA CTATTCGGCG CGACCGCTCG GCGAAGTGCG CTTCGCCGCG
AAAGGCATCG AAGGCCATGC GCTCGCACAG CCGGCCAGCT TCGAAGTGCG GCGCGGCGAG
ATTGTCGGCT TCTTCGGTCT GGTGGGCGCG GGCCGCAGCG AACTGATGCA TCTGGTGTAC
GGCGCCGATC ACAAGAAGGG CGGCGAGTTG CTGCTCGACG GCAAGCCGAT CAAAGTGCGC
AGCGCGGGCG AAGCGATCCG CCACGGCATC GTGCTGTGCC CGGAAGACCG CAAGGAAGAG
GGCATCGTCG CGATGGCGAC CGTGTCGGAG AACATCAATA TCAGTTGCCG CCGCCACTAT
CTGCGGGTGG GGATGTTCCT CGACCGCAAG AAGGAAGCGG AAACCGCCGA CCGTTTCATC
AAGCTGCTCA AGATCAAGAC GCCGAGCCGC CGCCAGAAAA TCCGCTTCCT GTCAGGCGGC
AATCAGCAGA AGGCGATTCT GTCGCGCTGG TTGGCCGAGC CGGATCTGAA AGTGGTGATT
CTCGACGAGC CGACGCGCGG GATCGACGTC GGCGCGAAGC ACGAAATCTA CAACGTGATC
TATCAGCTTG CCGAACGCGG CTGCGCGATC GTGATGATTT CGTCGGAGCT GCCGGAAGTG
CTCGGCGTGT CCGACCGCAT CGTCGTGATG CGCCAAGGCC GGATTTCCGG CGAGCTGACG
CGCAAGGATG CAACGGAACA ATCGGTGCTG AGCCTCGCGC TGCCGCAAAG CTCGACCGCA
CTGCCCGGAA CGCAAGCCGC TGCCCAACAG GCGGCCTGA
|
|---|
| Protein sequence | MSATLRFDNI GKVFPGVRAL DGVSFDVNVG QVHGLMGENG AGKSTLLKIL GGEYQPDSGR
VMIDGNEVRF TSAASSIAAG IAVIHQELQY VPDLTVAENL LLGQLPNSLG WVNKREAKRF
VRERLEAMGV ALDPNAKLRK LSIAQRQMVE ICKALLRNAR VIALDEPTSS LSHRETEVLF
KLVRDLRADN RAMIYISHRM DEIYELCDAC TIFRDGRKIA SHPTLEGVTR DTIVSEMVGR
EISDIYNYSA RPLGEVRFAA KGIEGHALAQ PASFEVRRGE IVGFFGLVGA GRSELMHLVY
GADHKKGGEL LLDGKPIKVR SAGEAIRHGI VLCPEDRKEE GIVAMATVSE NINISCRRHY
LRVGMFLDRK KEAETADRFI KLLKIKTPSR RQKIRFLSGG NQQKAILSRW LAEPDLKVVI
LDEPTRGIDV GAKHEIYNVI YQLAERGCAI VMISSELPEV LGVSDRIVVM RQGRISGELT
RKDATEQSVL SLALPQSSTA LPGTQAAAQQ AA
|
|---|
| |