| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bphyt_3409 |
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| Symbol | araH |
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| ID | 6282564 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia phytofirmans PsJN |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010681 |
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| Strand | - |
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| Start bp | 3837685 |
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| End bp | 3838701 |
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| Gene Length | 1017 bp |
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| Protein Length | 338 aa |
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| Translation table | 11 |
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| GC content | 62% |
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| IMG OID | 642622982 |
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| Product | L-arabinose transporter permease protein |
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| Protein accession | YP_001897023 |
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| Protein GI | 187925381 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG1172] Ribose/xylose/arabinose/galactoside ABC-type transport systems, permease components |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 12 |
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| Plasmid unclonability p-value | 0.0925142 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 24 |
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| Fosmid unclonability p-value | 0.0828764 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGCAAGCCA GAGAAAACCT CGCGCAACAG GCCGCCAAGG GCGCGGCCGA AGCGCTGATT
CCGCAGTCGA ACGACAAGGC CAAATGGTGG CAGCAGATCA CCGAATACAG CCTGATCGTG
ATCTTCGTCG TGATGTTCGC CACGATGTCG CTGACCGTCG ATCACTTCTT CTCGATCGAG
AACATGCTCG GCCTCGCGCT GTCGATCTCG CAGATCGGCA TGGTCTCGTG CACGATGATG
TTCTGTCTCG CCTCGCGCGA CTTCGACTTG TCGGTGGGTT CGACCGTCGC GTTCGCCGGC
GTGTTGTGTG CGATGGTGCT CAACGCCACC GGTAACACCT TTATCGCGAT CGTCGCGGCG
GTGGCGGCGG GCGGCGTGAT CGGCTTCGTC AACGGCGCGG TGATCGCGTA TCTGCGCATC
AACGCGCTGA TTACGACGCT CGCCACGATG GAAATCGTCC GCGGTCTCGG CTTTATCGTT
TCACACGGTC AGGCGGTGGG CGTGTCGTCG GATACGTTTA TCGCGCTGGG CGGTTTGAGC
TTCTTCGGCG TGTCGCTGCC GATCTGGGTC ACGCTGCTGT GCTTCATCGT GTTCGGCGTG
ATGCTCAACC AGACCGTGTA CGGCCGCAAT ACGCTCGCAA TCGGCGGCAA TCCGGAAGCG
TCGCGTCTGG CCGGTATCAA CGTGGAACGC ACGCGCGTCT ACATCTTCCT GATTCAGGGC
GCGGTGACCG CGCTGGCCGG CGTGATTCTG GCCTCACGTA TCACGTCGGG TCAGCCGAAC
GCGGCGCAGG GCTTCGAACT GAACGTGATT TCGGCCTGCG TGCTGGGCGG CGTCTCGCTG
CTCGGTGGAC GCGCGACGAT TTCCGGCGTG GTGATCGGCG TGCTGATCAT GGGCACGGTC
GAGAACGTGA TGAACCTGAT GAACATCGAC GCGTTCTACC AGTACCTCGT GCGCGGCGCG
ATCCTGCTCG CCGCCGTGCT GCTCGACCAG TTGAAGAACC GCGGCTCGCG CGACTAA
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| Protein sequence | MQARENLAQQ AAKGAAEALI PQSNDKAKWW QQITEYSLIV IFVVMFATMS LTVDHFFSIE
NMLGLALSIS QIGMVSCTMM FCLASRDFDL SVGSTVAFAG VLCAMVLNAT GNTFIAIVAA
VAAGGVIGFV NGAVIAYLRI NALITTLATM EIVRGLGFIV SHGQAVGVSS DTFIALGGLS
FFGVSLPIWV TLLCFIVFGV MLNQTVYGRN TLAIGGNPEA SRLAGINVER TRVYIFLIQG
AVTALAGVIL ASRITSGQPN AAQGFELNVI SACVLGGVSL LGGRATISGV VIGVLIMGTV
ENVMNLMNID AFYQYLVRGA ILLAAVLLDQ LKNRGSRD
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