Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Bphyt_3366 |
Symbol | |
ID | 6281309 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Burkholderia phytofirmans PsJN |
Kingdom | Bacteria |
Replicon accession | NC_010681 |
Strand | + |
Start bp | 3784070 |
End bp | 3785458 |
Gene Length | 1389 bp |
Protein Length | 462 aa |
Translation table | 11 |
GC content | 63% |
IMG OID | 642622940 |
Product | adenylosuccinate lyase |
Protein accession | YP_001896981 |
Protein GI | 187925339 |
COG category | [F] Nucleotide transport and metabolism |
COG ID | [COG0015] Adenylosuccinate lyase |
TIGRFAM ID | [TIGR00928] adenylosuccinate lyase |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 20 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 8 |
Fosmid unclonability p-value | 0.00000111293 |
Fosmid Hitchhiker | Yes |
Fosmid clonability | hitchhiker |
| |
Sequence |
Gene sequence | ATGTCCGACA CCCGCCCCGA CACCCTGTTC GCGCTGAACG CGCTCTCCCC GCTCGACGGC CGCTACGCCT CGAAAACCGA AGCCCTGCGC GACTGGCTCT CGGAAGCCGC ATTCATGCGC AATCGCGTGA CGGTCGAAAT CCATTGGCTG ATCGCGCTCT CGCGCGCCGG TTTCGCCGAA GTGCCGCGCT TTTCCGAAGC GTCCGAGCAA TTCCTGCTGC AGCTGGCCGA GCGCTTCACC GCGCACGACG CCGCGCGCAT CAAGGAAATC GAGCGTGTGA CGAATCACGA CGTGAAAGCG GTCGAGTACT GGCTGAAGGA ATCGGTGAAG GGTCAGGCGG AACTGGAGCG CGCGAGCGAG TTCATCCACT TCGCCTGCAC GTCGGAAGAC ATCAACAACA CCTCGCACGG CCTGATGCTG GCGGGCGCCC GCGAACACGT GATTCTGCCG GCGCTGCGCT CGGTGCATCA GCGTCTCGTC ACTCTCGCCC ACGCGCACGC CGAACAGCCG ATGCTGTCGC GCACGCACGG CCAGCCGGCG AGCCCGACCA CGCTCGGCAA AGAACTCGCC AACGTCGCGG CCCGCCTGGA ACGCGCGATC GATCGTATCG CCAAGGTCGA ACTGCTCGGC AAGATGAACG GCGCGGTCGG CAACTTCAAC GCGCACATGT CGGCCTATCC GGAGTTCGAC TGGGAAGCGT TCTCGCGCGA AGTGGTCGAG CAGCGCCTGA AGCTCACGTT CAATCCGTAC ACGATCCAGA TCGAGCCGCA CGACTACATG GCCGAACTGT TCGACGCGGT CTCGCGCGCC AACACGATCC TGCTGGATCT GGACCGTGAC GTATGGGGCT ACATCTCGGT CGGTTACTTC AAGCAGCGCA CCAAGGCCGG CGAAATCGGT TCGTCGACCA TGCCGCACAA GGTCAACCCG ATCGACTTCG AAAACTCCGA AGGCAATCTC GGCTTGGCTA ACGCCACACT GCGCCATCTC GCCGACAAGC TGCCGGTCTC GCGCTGGCAG CGCGACCTGA CCGATTCGAC GGTGCTGCGC AATATCGGCG TCGCGTTCGG CTACTCGCTG CTCGCGTACG ACTCGCTGAT CCGCGGCCTG GACAAGCTCG AAGTGAATGC CCAGCGTCTG AACGAAGACC TCGACAATTG CTGGGAAGTG CTGGCCGAGC CGGTGCAAAC GGTAATGCGC CGTTACGGCA TCGAGAATCC GTACGAGCAG TTGAAGGAAC TGACGCGCGG CAAGGGCATC ACGCGTGAAG CGCTGCAAAC GTTCGTCAAC GGCCTCGCGA TTCCGCAAGA TGCGAAAGAC CGCTTGCTCG CTATGACGCC GGGTTCGTAT ATCGGCAAGG CCGTCGAATT GGCTAAGCGG ATCGCTTAA
|
Protein sequence | MSDTRPDTLF ALNALSPLDG RYASKTEALR DWLSEAAFMR NRVTVEIHWL IALSRAGFAE VPRFSEASEQ FLLQLAERFT AHDAARIKEI ERVTNHDVKA VEYWLKESVK GQAELERASE FIHFACTSED INNTSHGLML AGAREHVILP ALRSVHQRLV TLAHAHAEQP MLSRTHGQPA SPTTLGKELA NVAARLERAI DRIAKVELLG KMNGAVGNFN AHMSAYPEFD WEAFSREVVE QRLKLTFNPY TIQIEPHDYM AELFDAVSRA NTILLDLDRD VWGYISVGYF KQRTKAGEIG SSTMPHKVNP IDFENSEGNL GLANATLRHL ADKLPVSRWQ RDLTDSTVLR NIGVAFGYSL LAYDSLIRGL DKLEVNAQRL NEDLDNCWEV LAEPVQTVMR RYGIENPYEQ LKELTRGKGI TREALQTFVN GLAIPQDAKD RLLAMTPGSY IGKAVELAKR IA
|
| |