Gene Bphyt_3366 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBphyt_3366 
Symbol 
ID6281309 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia phytofirmans PsJN 
KingdomBacteria 
Replicon accessionNC_010681 
Strand
Start bp3784070 
End bp3785458 
Gene Length1389 bp 
Protein Length462 aa 
Translation table11 
GC content63% 
IMG OID642622940 
Productadenylosuccinate lyase 
Protein accessionYP_001896981 
Protein GI187925339 
COG category[F] Nucleotide transport and metabolism 
COG ID[COG0015] Adenylosuccinate lyase 
TIGRFAM ID[TIGR00928] adenylosuccinate lyase 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.00000111293 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
ATGTCCGACA CCCGCCCCGA CACCCTGTTC GCGCTGAACG CGCTCTCCCC GCTCGACGGC 
CGCTACGCCT CGAAAACCGA AGCCCTGCGC GACTGGCTCT CGGAAGCCGC ATTCATGCGC
AATCGCGTGA CGGTCGAAAT CCATTGGCTG ATCGCGCTCT CGCGCGCCGG TTTCGCCGAA
GTGCCGCGCT TTTCCGAAGC GTCCGAGCAA TTCCTGCTGC AGCTGGCCGA GCGCTTCACC
GCGCACGACG CCGCGCGCAT CAAGGAAATC GAGCGTGTGA CGAATCACGA CGTGAAAGCG
GTCGAGTACT GGCTGAAGGA ATCGGTGAAG GGTCAGGCGG AACTGGAGCG CGCGAGCGAG
TTCATCCACT TCGCCTGCAC GTCGGAAGAC ATCAACAACA CCTCGCACGG CCTGATGCTG
GCGGGCGCCC GCGAACACGT GATTCTGCCG GCGCTGCGCT CGGTGCATCA GCGTCTCGTC
ACTCTCGCCC ACGCGCACGC CGAACAGCCG ATGCTGTCGC GCACGCACGG CCAGCCGGCG
AGCCCGACCA CGCTCGGCAA AGAACTCGCC AACGTCGCGG CCCGCCTGGA ACGCGCGATC
GATCGTATCG CCAAGGTCGA ACTGCTCGGC AAGATGAACG GCGCGGTCGG CAACTTCAAC
GCGCACATGT CGGCCTATCC GGAGTTCGAC TGGGAAGCGT TCTCGCGCGA AGTGGTCGAG
CAGCGCCTGA AGCTCACGTT CAATCCGTAC ACGATCCAGA TCGAGCCGCA CGACTACATG
GCCGAACTGT TCGACGCGGT CTCGCGCGCC AACACGATCC TGCTGGATCT GGACCGTGAC
GTATGGGGCT ACATCTCGGT CGGTTACTTC AAGCAGCGCA CCAAGGCCGG CGAAATCGGT
TCGTCGACCA TGCCGCACAA GGTCAACCCG ATCGACTTCG AAAACTCCGA AGGCAATCTC
GGCTTGGCTA ACGCCACACT GCGCCATCTC GCCGACAAGC TGCCGGTCTC GCGCTGGCAG
CGCGACCTGA CCGATTCGAC GGTGCTGCGC AATATCGGCG TCGCGTTCGG CTACTCGCTG
CTCGCGTACG ACTCGCTGAT CCGCGGCCTG GACAAGCTCG AAGTGAATGC CCAGCGTCTG
AACGAAGACC TCGACAATTG CTGGGAAGTG CTGGCCGAGC CGGTGCAAAC GGTAATGCGC
CGTTACGGCA TCGAGAATCC GTACGAGCAG TTGAAGGAAC TGACGCGCGG CAAGGGCATC
ACGCGTGAAG CGCTGCAAAC GTTCGTCAAC GGCCTCGCGA TTCCGCAAGA TGCGAAAGAC
CGCTTGCTCG CTATGACGCC GGGTTCGTAT ATCGGCAAGG CCGTCGAATT GGCTAAGCGG
ATCGCTTAA
 
Protein sequence
MSDTRPDTLF ALNALSPLDG RYASKTEALR DWLSEAAFMR NRVTVEIHWL IALSRAGFAE 
VPRFSEASEQ FLLQLAERFT AHDAARIKEI ERVTNHDVKA VEYWLKESVK GQAELERASE
FIHFACTSED INNTSHGLML AGAREHVILP ALRSVHQRLV TLAHAHAEQP MLSRTHGQPA
SPTTLGKELA NVAARLERAI DRIAKVELLG KMNGAVGNFN AHMSAYPEFD WEAFSREVVE
QRLKLTFNPY TIQIEPHDYM AELFDAVSRA NTILLDLDRD VWGYISVGYF KQRTKAGEIG
SSTMPHKVNP IDFENSEGNL GLANATLRHL ADKLPVSRWQ RDLTDSTVLR NIGVAFGYSL
LAYDSLIRGL DKLEVNAQRL NEDLDNCWEV LAEPVQTVMR RYGIENPYEQ LKELTRGKGI
TREALQTFVN GLAIPQDAKD RLLAMTPGSY IGKAVELAKR IA