Gene Bphyt_3357 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBphyt_3357 
Symbol 
ID6283956 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia phytofirmans PsJN 
KingdomBacteria 
Replicon accessionNC_010681 
Strand
Start bp3775534 
End bp3776595 
Gene Length1062 bp 
Protein Length353 aa 
Translation table11 
GC content64% 
IMG OID642622931 
Productdihydroorotase 
Protein accessionYP_001896972 
Protein GI187925330 
COG category[F] Nucleotide transport and metabolism 
COG ID[COG0418] Dihydroorotase 
TIGRFAM ID[TIGR00856] dihydroorotase, homodimeric type 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.00130334 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.00000212736 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
ATGACCGCTT CCAACGCTTC CATCGACTCC ATCACACTCG CCCGCCCGGA CGACTGGCAC 
CTGCACGTCC GCGACGGCGA AATGCTGGCC GCCGTGTTGC CGGACACCGC GCGCCAGTTT
GGCCGCGCGA TCATCATGCC GAACCTGAAG CCGCCGGTCA CGACCACCGC GATGGCGCAG
GCGTATCGCG AGCGGATCGT CGCCGCGATT CCTGAAGGCG CGAAGTTCGA ACCGTTGATG
ACGCTGTACC TGACCGACAA CACGCCGCCC GACGAGATCC GCCGCGCGCG CGAAAGCGGC
TTCGTGCATG GCGTAAAGCT GTATCCGGCG GGCGCGACGA CCAATTCGGA CGCGGGCGTC
ACCGACATCA TGAAGTGCGC CAAAACGCTC GAAGTCATGC AGGAAGTCGG TATGCCGCTG
CTCGTGCACG GCGAGGTGAC CGATTCGTCG ATCGATCTGT TCGACCGCGA GAAGGTGTTC
ATCGACCGGG TCATGACGCC GCTGCGCCGC GCGTTTCCGG CGCTGAAAGT GGTGTTCGAG
CACATCACCA CGAAAGACGC GGTCGACTAT ATCCGCGAAG CCGGCGCGGC GCCTGAGCTG
CTGGGCGCGA CGATCACGGC GCATCACCTG CTCTACAACC GCAACGCGAT CTTCCAGGGT
GGCATTCGCC CGCATTACTA CTGCCTGCCG GTGTTAAAGC GGGAGACGCA TCGCGTGGCG
CTGGTCGAGG CTGCGACGTC GGGCAATCCG CGTTTCTTCC TCGGCACGGA CAGTGCGCCG
CATCCGAAGG GGTTGAAAGA GCACGCGTGT GGCTGCGCGG GTTGCTACAC GGCATTGCAC
GCTTTGGAGC TGTACACGGA AGCGTTCGAT AACGCCAACG CGCTCGATAA GCTCGAAGGC
TTCGCGAGCT TTTTCGGCGC GGACTTCTAC GGTCTGCCGC GCAGCGAAGA GAAGGTCACG
CTGCGTCGTG AGGAATGGAC GCTGCCGGCC GAATTGCCGG TCGGCGATAC GCCGGTCGTG
CCGCTGCGCG GCGGCGAGTC GATTGGCTGG CGGCTGGTTT AA
 
Protein sequence
MTASNASIDS ITLARPDDWH LHVRDGEMLA AVLPDTARQF GRAIIMPNLK PPVTTTAMAQ 
AYRERIVAAI PEGAKFEPLM TLYLTDNTPP DEIRRARESG FVHGVKLYPA GATTNSDAGV
TDIMKCAKTL EVMQEVGMPL LVHGEVTDSS IDLFDREKVF IDRVMTPLRR AFPALKVVFE
HITTKDAVDY IREAGAAPEL LGATITAHHL LYNRNAIFQG GIRPHYYCLP VLKRETHRVA
LVEAATSGNP RFFLGTDSAP HPKGLKEHAC GCAGCYTALH ALELYTEAFD NANALDKLEG
FASFFGADFY GLPRSEEKVT LRREEWTLPA ELPVGDTPVV PLRGGESIGW RLV