Gene Bphyt_3352 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBphyt_3352 
Symbol 
ID6282123 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia phytofirmans PsJN 
KingdomBacteria 
Replicon accessionNC_010681 
Strand
Start bp3771525 
End bp3771890 
Gene Length366 bp 
Protein Length121 aa 
Translation table11 
GC content55% 
IMG OID642622926 
Productiron-sulfur cluster insertion protein ErpA 
Protein accessionYP_001896967 
Protein GI187925325 
COG category[S] Function unknown 
COG ID[COG0316] Uncharacterized conserved protein 
TIGRFAM ID[TIGR00049] Iron-sulfur cluster assembly accessory protein 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.00016934 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clones12 
Fosmid unclonability p-value0.0000376167 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
ATGAACGCAG TCACCGATAC ACCCGTGACC GAGATGCCCG CCCCCTTCGT TTTTACCGAC 
GCAGCGGCTG ACAAGGTCAA GCAACTGATC GAAGAAGAAG GCAATGCGGA CCTCAAACTG
CGCGTTTTCG TGCAGGGCGG CGGCTGCTCG GGCTTTCAGT ACGGTTTTAC CTTCGACGAA
GCCGTCAACG AAGACGACAC CGTCATGAAC AAGAGCGGCG TCCAGCTGTT GATCGATTCA
ATGAGCTACC AGTATCTGGT GGGCGCTGAG ATCGACTACA AGGACGACAT CAACGGCGCG
CAGTTCGTTA TCAAGAACCC GAATGCAACG ACCACTTGCG GTTGTGGTTC GTCGTTCTCG
GTGTAA
 
Protein sequence
MNAVTDTPVT EMPAPFVFTD AAADKVKQLI EEEGNADLKL RVFVQGGGCS GFQYGFTFDE 
AVNEDDTVMN KSGVQLLIDS MSYQYLVGAE IDYKDDINGA QFVIKNPNAT TTCGCGSSFS
V