Gene Bphyt_3343 details

Gene Information

• Locus tag: Bphyt_3343
• Symbol: ruvC
• ID: 6283657
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Burkholderia phytofirmans PsJN
• Kingdom: Bacteria
• Replicon accession: NC_010681
• Strand: +
• Start bp: 3763132
• End bp: 3763674
• Gene Length: 543 bp
• Protein Length: 180 aa
• Translation table: 11
• GC content: 63%
• IMG OID: 642622917
• Product: Holliday junction resolvase
• Protein accession: YP_001896958
• Protein GI: 187925316
• COG category: [L] Replication, recombination and repair
• COG ID: [COG0817] Holliday junction resolvasome, endonuclease subunit
• TIGRFAM ID: [TIGR00228] crossover junction endodeoxyribonuclease RuvC

Plasmid Coverage information

• Num covering plasmid clones: 26
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: 19
• Fosmid unclonability p-value: 0.00888007
• Fosmid Hitchhiker: Yes
• Fosmid clonability: hitchhiker

Sequence

Gene sequence

ATGAGAATTC TCGGCATCGA CCCCGGCCTG CGCGTGACCG GCTTCGGCGT GATCGACCAA 
AGCGGCCATA CGCTCAGCTA TGTCGCGAGC GGCGTCATTA AAACCGCCGA CGCCGATTTG 
CCGTCGCGTC TGGGTACCAT CTTCGAAGGC ATCTCCACAT TGATCCGCCA GCATTCGCCG 
GATCAATCGG CGATTGAAAA AGTCTTCGTC AACGTCAACC CACAATCCAC TTTGCTGCTC 
GGCCAGGCGC GCGGCGCGGC GATCTGTGGA CTGGTTGCGA GCGGGGTACC GGTCGCCGAA 
TATACGGCCC TGCAATTGAA GCAGGCCGTG GTGGGTTACG GCCGCGCAAC CAAGGAACAG 
ATGCAACAGA TGGTGGTGCG TCTGCTCAAC CTTTCCGGCG TACCCGGCAC CGACGCCGCC 
GACGCGCTCG GCATGGCAAT CTGCCACGCG CACGGCGGCA CGACGCTGAG CACGTTGGGC 
GGCATCGCGC CTTCGCTGGC GAAGAAGGGG CTGCGGGTGA GGCGCGGACG TTTGGTCGGA 
TAG 

 

Protein sequence

MRILGIDPGL RVTGFGVIDQ SGHTLSYVAS GVIKTADADL PSRLGTIFEG ISTLIRQHSP 
DQSAIEKVFV NVNPQSTLLL GQARGAAICG LVASGVPVAE YTALQLKQAV VGYGRATKEQ 
MQQMVVRLLN LSGVPGTDAA DALGMAICHA HGGTTLSTLG GIAPSLAKKG LRVRRGRLVG