Gene Bphyt_3332 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBphyt_3332 
Symbol 
ID6280987 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia phytofirmans PsJN 
KingdomBacteria 
Replicon accessionNC_010681 
Strand
Start bp3750942 
End bp3751679 
Gene Length738 bp 
Protein Length245 aa 
Translation table11 
GC content67% 
IMG OID642622906 
ProductChaC family protein 
Protein accessionYP_001896947 
Protein GI187925305 
COG category[P] Inorganic ion transport and metabolism 
COG ID[COG3703] Uncharacterized protein involved in cation transport 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones23 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones26 
Fosmid unclonability p-value0.171445 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGAGCACCT CTTCTCCTGA AGCCGACACC CGAACGCCCT GCCCGGACTA TCCGCCGGCG 
CTCGGCGAAT CCCGGCTGCT GACGGACGAG GAATTGCGCG CATCGCTCGA ATGCACGTTG
CGCGACTGGG ACCGCAAGAG CGACCTGTGG CTGTTCGGCT ACGGCTCGCT GATCTGGAAT
CCCGGCCTGC CCACCGTCGA AGCCACCCGA TCCAAGGTCC ACGGCTATCA CCGGGGGCTC
TACCTGTGGT CGCGTGTAAA TCGCGGCACG CCCGAACAGC CGGGCCTCGT GCTCGCGCTC
GATCGCGGCG GTTCGTGCAC CGGCATCGCA TTCCGGCTCG CTGCCGAAGG CTCGATGCCG
CATCTCGAAG CGCTCTGGCG CCGCGAAATG GCGATGGGTT CATACCGCCC GGCGTGGCTG
CCGTGCGTGC TCGCCGACGG CCGGCGCGTC GACGCACTGG CCTTCGTCAT GCGCCGCGAC
GTGCCGAGCT ACACCGGCAA GTTGCGCGAT GACATCGTCA AAACGGTGTT CGGCTGCGCG
AGCGGGCGCT ATGGCACCAC GCTCGACTAC GTTAGCCGGA CAGTGCATGC GTTGCGTGAG
AGCGGCATGC CCGACCGCGC ACTCGAAGCG TTGCTCGAAC GGTGCCGCGA GGAAAGCCGC
GAGGAAAGCC GCGAAGCAAG CCGCGAAGCA AGCCGCGAAG CAAGCGTAAA AGCCGGCCAG
AAAGCGGACC AGAAATAA
 
Protein sequence
MSTSSPEADT RTPCPDYPPA LGESRLLTDE ELRASLECTL RDWDRKSDLW LFGYGSLIWN 
PGLPTVEATR SKVHGYHRGL YLWSRVNRGT PEQPGLVLAL DRGGSCTGIA FRLAAEGSMP
HLEALWRREM AMGSYRPAWL PCVLADGRRV DALAFVMRRD VPSYTGKLRD DIVKTVFGCA
SGRYGTTLDY VSRTVHALRE SGMPDRALEA LLERCREESR EESREASREA SREASVKAGQ
KADQK