Gene Bphyt_3328 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBphyt_3328 
Symbol 
ID6284244 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia phytofirmans PsJN 
KingdomBacteria 
Replicon accessionNC_010681 
Strand
Start bp3746745 
End bp3747728 
Gene Length984 bp 
Protein Length327 aa 
Translation table11 
GC content67% 
IMG OID642622902 
Producttranscriptional regulator, LysR family 
Protein accessionYP_001896943 
Protein GI187925301 
COG category[K] Transcription 
COG ID[COG0583] Transcriptional regulator 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones25 
Fosmid unclonability p-value0.125153 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGACAACC TCGGTGACAT CCGTCTGTTC GTCGAAGCGG CGCAGCAGGG CAGCCTGTCG 
GCGGCCGGCC GCAAGATGGG ACTGACGCCG GCCGCCGCCA GCGCGCGCCT TGCCAAGCTC
GAAGCCGGCC TCAAAACGCG CCTGTTCGAA CGCACCACCC GTCAGCTCAG GCTCACCGAC
GAGGGCCGCC TGTACCTGAA TTGCTGCCGT CAGGCGCTGC AATCGCTCGA CGACGCCGAA
GCCGCGCTGC AAGCCGGCCA AGGCGTCGTG CGCGGGAAAG TGCGGGTATC GGCGACTTCG
GACTTCGGCC GTAATCTGCT GATGCACTGG CTCGACGAAT TCAACGCGCT GTATCCGGAA
GTGACCTTCG CGCTCACTTT GTCGGACTCG CTGGCAAATC TGGTGCAGGA GGACATCGAT
CTGGCGATCC GCTTCGGCGT GCCGCAGGAC AGTTCGCTGG TCGCCCGCAA GCTGGCGCCG
AACCGGCGCG TGCTGTGCGC GTCGCCGGAC TACATCGCGC GTAAGGGCGA ACCGAAAGAT
CCGCACGATC TGGCCAATTT CGACTGCATC GTGCTGGCCA CCGCCACCGG GCTGGCGAAC
GAGTGGCGCT TCACGCGCGG CGACGAGGTG CAGCACTACA CCGTGCCGTT CGAAACCGCC
CGCGAGACCA ACGACGGCGC CGTCGCCCGC GAATGGGCGC TGCGCGGCTA CGGCATCGTG
ATCAAGTCGA TGTGGGACGT GGAAGCCGAC CTGCGCGCCG ACGGCCTGAA GATCCTGCTG
CCGGAATGGC GTTATCCGGA TGCGCCGCTG CACGCGCTCT ACCATCGCAA CCGCTTCATG
GCGCCGCGCG TGCGCGTGTT GCTGGATTTC CTGAGCGAGC GTTTCGCGCA GGTGTCGGAC
GAACTGGAAG GTCTGCTGGG CTTGCCGCCG GAGCGTCCGC GCCGGCAGGC GGCCGGGGAA
ACCGCATCGC GCGAAGGGCT ATAA
 
Protein sequence
MDNLGDIRLF VEAAQQGSLS AAGRKMGLTP AAASARLAKL EAGLKTRLFE RTTRQLRLTD 
EGRLYLNCCR QALQSLDDAE AALQAGQGVV RGKVRVSATS DFGRNLLMHW LDEFNALYPE
VTFALTLSDS LANLVQEDID LAIRFGVPQD SSLVARKLAP NRRVLCASPD YIARKGEPKD
PHDLANFDCI VLATATGLAN EWRFTRGDEV QHYTVPFETA RETNDGAVAR EWALRGYGIV
IKSMWDVEAD LRADGLKILL PEWRYPDAPL HALYHRNRFM APRVRVLLDF LSERFAQVSD
ELEGLLGLPP ERPRRQAAGE TASREGL