| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bphyt_3298 |
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| Symbol | |
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| ID | 6282145 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia phytofirmans PsJN |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010681 |
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| Strand | + |
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| Start bp | 3715675 |
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| End bp | 3717333 |
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| Gene Length | 1659 bp |
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| Protein Length | 552 aa |
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| Translation table | 11 |
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| GC content | 63% |
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| IMG OID | 642622871 |
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| Product | General substrate transporter |
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| Protein accession | YP_001896913 |
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| Protein GI | 187925271 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG2814] Arabinose efflux permease |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 14 |
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| Plasmid unclonability p-value | 0.423953 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 29 |
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| Fosmid unclonability p-value | 0.447243 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGCTACCG TTGGCGGGCA AATCTCGCAC GTGCCGATGA CGCGCGAAGA GAAGCGGGTG
ATCTTCGCAT CGTCGCTGGG TACGGTTTTC GAGTGGTACG ACTTCTATCT GGCCGGCTCG
CTGGCGGCCT TCATCAGCAA GAGCTTCTTC TCCGGCGTCA ATCCGACAGC CGCCTTCATC
TTCACGCTGC TGAGCTTCGC GGCCGGCTTC GCGGTCCGGC CGTTCGGCGC GATCGTGTTC
GGGCGGCTCG GCGATATGGT CGGGCGCAAG TACACGTTCC TCGTGACGAT CGTGATCATG
GGCCTGTCGA CGTTCCTGGT CGGCTTCCTG CCGGGCTATG CGTCGATCGG CTTCGCGTCG
CCCGTGATCT TCATTGCGAT GCGGATGCTG CAAGGCCTCG CGCTCGGCGG CGAGTACGGC
GGCGCTGCCA CCTATGTGGC CGAACACGCG CCGGCGGGAC GCCGCGGCTT CTATACGGCC
TGGATCCAGA CGACCGCCAC GCTCGGCCTG TTCCTGTCGC TGCTGGTGAT TCTCGGCGTG
CGCACCGCAA TGGGTGAGGA CGCGTTCGGC GACTGGGGCT GGCGCATTCC GTTCATCGTC
TCGATCCTTC TGCTGGCCGT GTCGGTGTGG ATTCGTCTGC AACTGCACGA ATCGCCGGTG
TTCGAGCGCA TCAAGTCCGA AGGCAAGACC TCCAAGGCGC CGCTGACTGA AGCCTTCGGC
CAGTGGAAGA ACCTGAAGAT CGTGATTCTC GCGCTGATCG GCCTTACCGC CGGCCAGGCC
GTGGTCTGGT ACACGGGCCA GTTCTACACG CTGTTCTTCC TGACGCAGAC GCTGAAGGTA
GACGGCAGCA GCGCCAACAT CATGATCGCG ATCGCGCTCC TGATCGGCAC GCCGTTCTTC
CTGTTCTTCG GCTCGCTGTC GGATCGTATC GGCCGCAAGC CGATCATCAT GGCCGGCCTG
CTGATCGCCG CATGCACGTA CTTCCCGCTG TTCAAGGCGC TGGCGCACTA CACGAACCCG
GCACTGGAAG CGGCGACCGC GAAAGCGCCG ATCGTCGTGA TCGCGAATCC GGACGAGTGC
TCGTTCCAGT TCAACCCGGT CGGCACCGCG AAGTTCACGA GCTCCTGCGA CATTGCCAAG
AGTGCGCTTT CGAAGGCCGG CTTGAACTAC GAGAACGTCG CCGCGCCGGC GGGCACGCTG
GCGCAGATCA AGGTCGGCGA TACGGTGATC AACACGTATG ACGGCAAGGC CGCGGACGCC
AAGGATCAAG GCAAAGCGTT CGACAAGACC CTTGCGACGA CGCTGAAGAC CGCCGGTTAC
GCGCCGAAGG CCGATCCCAC GCAGATCAAC TGGCCAATGA CCGTGGTGAT ACTGACGATC
ATGATGATCT ACGTGACGAT GGTCTACGGC CCGATCGCGG CGATGCTGGT GGAGATGTTC
CCGACGCGCA TCCGCTATAC CTCGATGTCG CTGCCGTATC ACATCGGCAA TGGCTGGTTC
GGCGGCTTCC TGCCGGCCAC CGCCTTCGCG ATCGTGGCGG CGAAGGGCAA TATCTTTTCG
GGGCTGTGGT ATCCGATCGT GATCGCGCTC GTCACCTTTG TGATCGGCAT GCTGTTTGTC
CGGGAGACCA AGGACTCGGA CATCTATGCG AAGGATTGA
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| Protein sequence | MATVGGQISH VPMTREEKRV IFASSLGTVF EWYDFYLAGS LAAFISKSFF SGVNPTAAFI
FTLLSFAAGF AVRPFGAIVF GRLGDMVGRK YTFLVTIVIM GLSTFLVGFL PGYASIGFAS
PVIFIAMRML QGLALGGEYG GAATYVAEHA PAGRRGFYTA WIQTTATLGL FLSLLVILGV
RTAMGEDAFG DWGWRIPFIV SILLLAVSVW IRLQLHESPV FERIKSEGKT SKAPLTEAFG
QWKNLKIVIL ALIGLTAGQA VVWYTGQFYT LFFLTQTLKV DGSSANIMIA IALLIGTPFF
LFFGSLSDRI GRKPIIMAGL LIAACTYFPL FKALAHYTNP ALEAATAKAP IVVIANPDEC
SFQFNPVGTA KFTSSCDIAK SALSKAGLNY ENVAAPAGTL AQIKVGDTVI NTYDGKAADA
KDQGKAFDKT LATTLKTAGY APKADPTQIN WPMTVVILTI MMIYVTMVYG PIAAMLVEMF
PTRIRYTSMS LPYHIGNGWF GGFLPATAFA IVAAKGNIFS GLWYPIVIAL VTFVIGMLFV
RETKDSDIYA KD
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