Gene Bphyt_3274 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBphyt_3274 
Symbol 
ID6281319 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia phytofirmans PsJN 
KingdomBacteria 
Replicon accessionNC_010681 
Strand
Start bp3690122 
End bp3691012 
Gene Length891 bp 
Protein Length296 aa 
Translation table11 
GC content62% 
IMG OID642622847 
Productphosphoribosylaminoimidazole-succinocarboxamide synthase 
Protein accessionYP_001896889 
Protein GI187925247 
COG category[F] Nucleotide transport and metabolism 
COG ID[COG0152] Phosphoribosylaminoimidazolesuccinocarboxamide (SAICAR) synthase 
TIGRFAM ID[TIGR00081] phosphoribosylaminoimidazole-succinocarboxamide synthase 


Plasmid Coverage information

Num covering plasmid clones21 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones35 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTCTACCC TCTACGAATC CACGCTCCGC TCGCTGCCGT TGCTCGGCCG CGGTAAAGTC 
CGCGACAACT ATGCGGTGGG CAACGACCAG TTGCTGATCG TCACGACCGA CCGTCTGTCG
GCGTTCGACG TCATCATGGG CGAGCCGATT CCGAATAAGG GACGCGTGCT CAACGAAATG
GCGAACTTCT GGTTCGAGAA ACTGAAGCAT GTGGTGCCGA ACCACCTGAC GGGCGTCGCG
CCTGAATCCG TGGTGGCGGC CGACGAAGTC GAGCAGGTCA AGGGCCGCGC GGTCGTCGTG
AAGCGTCTGG AACCGATCCT CGTCGAAGCC GTGGTGCGAG GCTATCTGGC CGGCAGCGGC
TGGAAAGACT ACCAGGCAAC CGGCTCGGTG TGCGGCGTCG AACTGCCGCC GGGTCTGCAA
AACGCACAGA AACTGCCCGA GCCGATCTTC ACGCCGGCGG CCAAGGCCGA AATGGGCCAT
CACGACGAAA ACATCACCTA CAACGAGATG GAGCGCCGCA TCGGCACCGA ACTGTCGGCC
ACGATCCGCG ACATCTCGAT CAAGCTATAC AAGGAAGCGG CTGACTACGC GGCCACGCGC
GGCATCATCA TCGCGGATAC GAAGTTCGAG TTCGGCCTGG ACAATCACGG CAAGCTGTAT
CTGATGGACG AGGCGTTGAC CGCGGATTCG TCGCGCTTCT GGCCGGCCGA CCAGTATCAG
GTCGGCACCA ACCCGCCGTC GTTCGACAAG CAGTTCGTGC GCGACTGGCT CGAAACCCAG
CCGTGGAAGA AAGAGCCGCC GGCACCGAAG CTGCCGGACG ACGTGGTCAC GAAGACGGGC
GAAAAGTATC AGGAAGCGCT CGAACGCCTG ACCGGACACA AGCTCGCCTG A
 
Protein sequence
MSTLYESTLR SLPLLGRGKV RDNYAVGNDQ LLIVTTDRLS AFDVIMGEPI PNKGRVLNEM 
ANFWFEKLKH VVPNHLTGVA PESVVAADEV EQVKGRAVVV KRLEPILVEA VVRGYLAGSG
WKDYQATGSV CGVELPPGLQ NAQKLPEPIF TPAAKAEMGH HDENITYNEM ERRIGTELSA
TIRDISIKLY KEAADYAATR GIIIADTKFE FGLDNHGKLY LMDEALTADS SRFWPADQYQ
VGTNPPSFDK QFVRDWLETQ PWKKEPPAPK LPDDVVTKTG EKYQEALERL TGHKLA