| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bphyt_3265 |
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| Symbol | |
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| ID | 6283135 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia phytofirmans PsJN |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010681 |
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| Strand | - |
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| Start bp | 3678789 |
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| End bp | 3680303 |
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| Gene Length | 1515 bp |
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| Protein Length | 504 aa |
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| Translation table | 11 |
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| GC content | 65% |
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| IMG OID | 642622838 |
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| Product | protease Do |
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| Protein accession | YP_001896880 |
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| Protein GI | 187925238 |
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| COG category | [O] Posttranslational modification, protein turnover, chaperones |
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| COG ID | [COG0265] Trypsin-like serine proteases, typically periplasmic, contain C-terminal PDZ domain |
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| TIGRFAM ID | [TIGR02037] periplasmic serine protease, Do/DeqQ family |
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Plasmid Coverage information |
| Num covering plasmid clones | 20 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 37 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAACGCGA AAACCTTGTC CCGCAGCGCT GTTGCAATCG CTGTCGCCGT AGCGCTTTCC
GCCGGCTATG TAGCGGGGCA TCGCGACGTG CCCGCGCCGC AGGTCATCTC GCCGGCGCAA
GCCGCGATGA TGCCCGCTGA AGCTGCCGCC AAAACCGGCA TTCCCGACTT CTCGGGCCTC
GTCGAAACCT ACGGCCCAGC CGTGGTGAAC ATCAGCGCGA AGCACGTCGT CAAGCAGACG
GCGCTGCGCG GCAATCCCGG TAATGGCAAC GGCGGCAATC AGTTGCCGAT CGATCCGAGC
GATCCGTTCT ACCAGTTCTA CAAGCACTTT TTCGGCGGTA TGCCGGGCAT GCAAGGCGGC
GACGGCGGCG ATGCGCCCGA TCAGCCGAGC GCGAGCCTGG GTTCGGGATT TATCGTCAGC
AGTGACGGCT ACATCCTGAC CAACGCGCAC GTGGTGGACG GCGCGAACGT CGTCACTGTG
AAGCTGACCG ACAAGCGCGA ATTCAAGGCG AAGGTGGTCG GCGCCGACAA GCAGTCCGAC
GTCGCCGTGC TCAAGATCGA CGCGAGCAAC CTGCCGACCG TGAAGATCGG CGATCCGCGC
CAGAGCAAGG TCGGCCAGTG GGTCGTCGCG ATCGGCTCGC CTTACGGTTT CGATAACACG
GTGACCTCGG GCATCATCAG CGCGAAATCG CGCTCGCTGC CTAACGAGAA CTACACCCCG
TTCATTCAGA CCGACGTGCC GGTGAATCCG GGCAATTCCG GTGGCCCGCT CTTCAATCTG
CAAGGCGAAG TGATCGGTAT CAACTCGATG ATCTATTCGC AGACGGGCGG CTTCCAGGGC
CTTTCGTTCG CCATCCCGAT CAATGAGGCG ATCAAGGTCA AGGACGACAT CGTCAAGACC
GGCCACGTGA GCCGCGGCCG TCTCGGCGTG GCGGTGCAGG GCATGAACCA GACGCTCGCC
AATTCGTTCG GCATGCAGAA GCCGCAAGGC GCGCTGGTCA GCTCGGTCGA TCCGGGCGGC
CCGGCGGCCA AGGGCGGTTT GCAGCCCGGC GACGTGATCC TGTCGGTGAA CGGCGAACCG
GTTGGCGACT CGGCCGATCT GCCAGCGCAG GTCGCGGGCC TGGCGCCGGG TACTTCGGCG
ACCGTGCAGG TCTGGCGCGA CAAGGCCACC AAGGACCTGA AGGTGACCAT CGGCTCGCTG
TCGGATGCGA AGGTCGCCTC GGACAAGGCC GATCAGCCGA CCCAGCTGCA AGGCCGGCTC
GGCGTGGCGG TGCGGCCGCT GACGCCGGAA GAGAAGAGCG GCGCGTCGGT CTCGCACGGT
CTGCTGGTGC AGCAATCGGG CGGCGCGGCG GAAAGCGCCG GCATCCAGCC GGGCGACGTG
ATTCTCGCGG TCAACGGCCG GCCCATTTCG AGCGTCGATC AACTGAAGCA GATGATCGCC
GGTGCCGGCA ACAGCATCGC GTTGCTGATC CAGCGCGACA ACGCGCAGAT CTTCGTGCCG
GTCGATCTCG GCTGA
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| Protein sequence | MNAKTLSRSA VAIAVAVALS AGYVAGHRDV PAPQVISPAQ AAMMPAEAAA KTGIPDFSGL
VETYGPAVVN ISAKHVVKQT ALRGNPGNGN GGNQLPIDPS DPFYQFYKHF FGGMPGMQGG
DGGDAPDQPS ASLGSGFIVS SDGYILTNAH VVDGANVVTV KLTDKREFKA KVVGADKQSD
VAVLKIDASN LPTVKIGDPR QSKVGQWVVA IGSPYGFDNT VTSGIISAKS RSLPNENYTP
FIQTDVPVNP GNSGGPLFNL QGEVIGINSM IYSQTGGFQG LSFAIPINEA IKVKDDIVKT
GHVSRGRLGV AVQGMNQTLA NSFGMQKPQG ALVSSVDPGG PAAKGGLQPG DVILSVNGEP
VGDSADLPAQ VAGLAPGTSA TVQVWRDKAT KDLKVTIGSL SDAKVASDKA DQPTQLQGRL
GVAVRPLTPE EKSGASVSHG LLVQQSGGAA ESAGIQPGDV ILAVNGRPIS SVDQLKQMIA
GAGNSIALLI QRDNAQIFVP VDLG
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