| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bphyt_3258 |
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| Symbol | |
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| ID | 6282396 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia phytofirmans PsJN |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010681 |
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| Strand | - |
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| Start bp | 3672206 |
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| End bp | 3673438 |
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| Gene Length | 1233 bp |
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| Protein Length | 410 aa |
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| Translation table | 11 |
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| GC content | 66% |
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| IMG OID | 642622831 |
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| Product | efflux transporter, RND family, MFP subunit |
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| Protein accession | YP_001896873 |
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| Protein GI | 187925231 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG0845] Membrane-fusion protein |
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| TIGRFAM ID | [TIGR01730] RND family efflux transporter, MFP subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | 13 |
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| Plasmid unclonability p-value | 0.110627 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 32 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCGCGTCG AACGGGTTCC ATTCCGCTTA ATCAGTGCCG CGACGGCTGC CGTATTGCTG
GCAGCGTGCG GACCAAAACA ATCTGCCCCG CCGCAACAGA CGCCGGAAGT CGGCGTCGTC
ACCGTTCAGC CGACGGCCGT GCCCGTCGTC ACCGAATTGC CCGGCCGCAC CAGTGCCTTC
CTCGTCGCGC AAGTGCGCGC GCGGGTCGAC GGCATCGTGT TGCGCCGCGA GTTTACGGAA
GGCAGCCAGG TCAAAGCGGG TCAACGTCTG TACAAGATCG ATCCGGCGCC GTACATCGCC
ACGCTGAACA ACGCCAAGGC GACGCTGGCG AAGGCGCAGG CCAACCTCGT GTCGACCACG
GCGCAGGCCA ATCGCTACAA GGTGCTGGTC GCCGCCAACG CGGTCAGCAA GCAGGACTAC
GACAACGCGG TGGCTTCGGA AGGCCAGGCC GCGGCTGACG TCGCCGCGGG CAAGGCGGCG
GTCGACACGG CGCAGATCAA CCTCGGCTAC ACGGATGTGG TTTCGCCGGT GAGCGGCCAG
GTCGGCATCT CGCAGGTCAC GCCGGGCGCC TACGTACAGG CGAGCGCCGC GACGTTGATG
GCGACCGTGC AGACGCTGGA TCCGGTCTAT GTGGACCTGA CGCAATCTAG CCTCGACGGG
CTGAAGCTGC GCCGCGACAT GCAGGAAGGG CGCCTGAAGA CCACGGGTCC GGACGCCGCC
AAGGTGTCGC TGATTCTGGA AGACGGCCGC ACCTATTCGG AGAAGGGCAA GCTGCAGTTC
ACCGACGTGA CGGTCGACCA GGGCACGGGT TCGGTTACCG TGCGCGCGAT CTTCAAGAAC
GCGGACAAGG TGCTGCTGCC GGGCATGTTC GTGCGCGCGC GCATCGAAGA AGGCGTCAAC
GAGAATGCGC TCGTCGTACC GCAAGTCGGC ATCACGCATG ACCAGAAGGG TCAGCCGACC
GCGCTGGTCG TCGGTGACGA CAATAAGGTG GCGTTGCGTC AGCTGGTCAC GTCGGGCACG
TACGGTTCGA ACTGGGTGGT CGAAAGCGGC CTGAAGCCGG GCGACCGCGT GATCGTGCAG
GGCACCGACA AGGCGAAGCC CGGCATGCAG GTCAAGACCG TTGCCGCGCA ACTTCCCGCC
ACACCCGCTT CCGGCGCTGC TGCTCAGAGC GCGCCGGCCG CCAGCGGTGC TGCGCAGACG
GCACAACCTG CCTCCGCTGC ATCGGGCGCG TAA
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| Protein sequence | MRVERVPFRL ISAATAAVLL AACGPKQSAP PQQTPEVGVV TVQPTAVPVV TELPGRTSAF
LVAQVRARVD GIVLRREFTE GSQVKAGQRL YKIDPAPYIA TLNNAKATLA KAQANLVSTT
AQANRYKVLV AANAVSKQDY DNAVASEGQA AADVAAGKAA VDTAQINLGY TDVVSPVSGQ
VGISQVTPGA YVQASAATLM ATVQTLDPVY VDLTQSSLDG LKLRRDMQEG RLKTTGPDAA
KVSLILEDGR TYSEKGKLQF TDVTVDQGTG SVTVRAIFKN ADKVLLPGMF VRARIEEGVN
ENALVVPQVG ITHDQKGQPT ALVVGDDNKV ALRQLVTSGT YGSNWVVESG LKPGDRVIVQ
GTDKAKPGMQ VKTVAAQLPA TPASGAAAQS APAASGAAQT AQPASAASGA
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