| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bphyt_3257 |
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| Symbol | |
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| ID | 6282395 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia phytofirmans PsJN |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010681 |
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| Strand | - |
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| Start bp | 3668966 |
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| End bp | 3672187 |
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| Gene Length | 3222 bp |
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| Protein Length | 1073 aa |
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| Translation table | 11 |
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| GC content | 62% |
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| IMG OID | 642622830 |
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| Product | transporter, hydrophobe/amphiphile efflux-1 (HAE1) family |
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| Protein accession | YP_001896872 |
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| Protein GI | 187925230 |
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| COG category | [V] Defense mechanisms |
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| COG ID | [COG0841] Cation/multidrug efflux pump |
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| TIGRFAM ID | [TIGR00915] The (Largely Gram-negative Bacterial) Hydrophobe/Amphiphile Efflux-1 (HAE1) Family
[TIGR01131] ATP synthase subunit 6 (eukaryotes),also subunit A (prokaryotes) |
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Plasmid Coverage information |
| Num covering plasmid clones | 9 |
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| Plasmid unclonability p-value | 0.662335 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 29 |
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| Fosmid unclonability p-value | 0.89676 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGCAAAGT TCTTCATTGA TCGCCCGATT TTTGCATGGG TGATCGCCAT TATTCTGATG
CTCGCGGGTA TCGCGTCGGT CTTCACATTG CCGATCGCGC AGTACCCGAC CATCGCGCCG
CCGGCCGTGC AGATCAGCGC GACGTACCCG GGCGCATCGG CGAAGACGGT GGAAAACACC
GTCACGCAGG TGATCGAGCA GCAGATGAGT GGTCTCGACC ACTTGCTGTA TCTGTCGTCC
ACCTCGGACG ACTCCGGTAC GGCAACCATC ACGTTGACGT TCGCGGCCGG CACCAATCCT
GACATCGCGC AGGTGCAGGT GCAGAACAAG CTGCAGCTCG CCACGCCGCT CCTGCCGCAA
GCCGTGCAGC AGTTGGGCAC CAAGGTCACG AAGTCGAGCA GCAGCTTCTT GCTGGTCATG
GCGTTCGTGT CCGAAGACGG CAGCATGAAC AAGTACGACC TGGCGAACTA CGTCGCGTCG
AACATTCAGG ATCCGGTCAG CCGTATCGAC GGCGTGGGCA CGGTGACGCT GTTCGGTTCG
CAGTACGCCA TGCGGATCTG GCTGGACGCG AACAAGCTGA CCAACTTCGG CCTCACGCCG
GTGGACGTCG AAACCGCGTT GCAAGCGCAG AACGTGCAGG TCGCGGGCGG TTCGCTCGGC
GGCACGCCTT CCGTGCCGGG CCAGGTGCTG CAGGCCACCA TCACGGAAGC CACGCTGCTG
AATACGCCTG AACAGTTCGG CAACGTGCTG CTGAAGGTGA ACCAGGACGG TTCGCGGGTT
CGCATCAAGG ACGTGGCACG CATCGAGCTG GGCGGCGAAA ACTACAACTT CGACACCAAG
TACAACGGCC AGCCGACGGC AGGCTTCGGT ATCCAGCTCG CTACCGGCGC GAATGCGCTG
GCTACCGCGA AGGCGGTGCG CGCGAAGGTC GCCGAACTGT CGAAGTACTT CCCGCACGGT
CTGGTGGTGC AGTACCCGTA CGACACCACG CCGTTCGTGC GCCTGTCGAT CGAAGAAGTG
GTCAAGACGC TGCTCGAAGG TATCGTGCTG GTGTTCCTGG TCATGTACCT GTTCCTGCAG
AACCTGCGCG CCACGCTGAT CCCGACGATC GCCGTGCCGG TGGTGCTGCT GGGCACGTTC
GCGATCATGG GTCTGGTGGG CTTCTCGATC AACACGCTGT CCATGTTCGG GCTCGTGCTG
GCGATCGGCT TGCTGGTGGA CGATGCGATC GTGGTGGTGG AAAACGTCGA GCGGGTGATG
CAGGAGGAGG GCTTGTCGCC TCGAGATGCC ACCCGCAAGG CGATGGATCA GATTACCGGC
GCGCTGGTCG GCGTGGCGCT CGTGCTGTCG GCGGTGTTCG TGCCGGTGGC GTTCTCGGGC
GGTTCGGTCG GCGCAATTTA CCGGCAGTTC TCGCTGACGA TCGTGGCGGC CATGGTGCTG
TCGGTGCTGG TCGCGTTGAT TCTGACGCCG GCATTGTGCG CGACGATTCT CAAGCCGATC
GAGCAGGGGC ATCAGGAAAA AACCACCGGT TTCTTCGGCT GGTTCAACCG CACCTTCAAC
AAGAGCCGCG ACAAGTATCA CTCGGGTGTG CACCACGTGA TCAAGCGCTC GGGCCGTTGG
CTAATCATCT ATATGGTGGT GATTTTCGCG GTCGGTCTGC TGTTCGTGAA GTTGCCCAAG
TCGTTCCTGC CTGACGAAGA CCAGGGCACG ATGTTCGTGC TGGTGCAAAC GCCGTCGGGC
TCGACGCAGG AAACCACGGC GCGCGCGTTG AAGGACGTGT CCGACTATCT GCTCAACACC
GAGAAGAGCA TTGTCGAATC GACCTTTACC GTGAACGGCT TCAGCTTCGC CGGCCGTGGC
CAGAATGCGG GTCTCGTGTT CGTGCGGATG AAGGATTACG CGCAACGTCA GCACTCGGAT
CAGAAGGTGC AGGCGCTGGT GGGTCGTCTC TTCATGCACT TCGGCAGCTA CAAGAACGCG
CTGGTGTATC CGGTGAATCC GCCGTCGATT CCTGAACTCG GCACGGCCGC GGGCTTCGAC
TTCGAATTGC AGGATCGCGC GGGCGTCGGT CACGAAAAGC TGATGGAAGC ACGCAACATG
TTGCTGGGCA TGGCGGCGAA AGATCCGACG CTGGCTCAGG TGCGTCCGAA CGGCCTGAAC
GACACGCCGC AGTTCAAGGT GGATATCGAT CACGAGAAGG CTTCGGCCCT CGGCGTGTCG
CTGTCCGCGA TCGACCAGAC GTTCTCGATC GCGTGGGCGT CGCAGTACGT GAACAACTTC
CTCGATACCG ACGGCCGGAT CAAGAAGGTG TATCTGCAAG GCGATGCTCC GTTCCGCATG
ACGCCGGAAG ACCTGAACGC GTGGTACGTG CGCAATAGCG CGGGTGGCAT GGTGCCGTTC
TCGTCGTTCG CCAGCGGCAC GTGGACCTAC GGTTCGCCGA AGCTGGAGCG CTACAACGGT
ATTTCCGCGG TGGAAATCCA GGGCGCGGCG GCACCGGGCA AGTCGACCGG TCAAGCCATG
ACGGCTATGG AAGCGCTCGT GGCGAAGCTG CCGGCCGGCG TGGGCTACGA GTGGACGGGT
CTGTCGCTGC AGGAACGCCA GTCCGGTTCG CAGGCGCCGA TTCTGTACGG CATCTCGATC
CTCGTCGTGT TCCTGTGTCT CGCGGCGCTG TATGAAAGCT GGTCGATCCC GTTCTCGGTG
ATCATGGTGG TGCCGCTCGG CGTGATCGGC GCACTGCTGG CCGCTACGCT GCGCGGACTC
GAGAACGACG TGTTCTTCCA GGTGGGTCTG TTGACCACCG TGGGTCTGTC GGCGAAGAAC
GCGATTCTGA TCGTGGAATT CGCCCGCGAG CTGCAGCAGG GTGAAGGCAT GGGGCCGATC
GAGGCCGCGC TGGAAGCAGC GCGTCTGCGG TTGCGTCCGA TTCTGATGAC CTCGCTCGCG
TTCATTCTCG GCGTGATGCC GCTCGCGATC AGTAACGGCG CGGGTTCGGC CAGCCAGCAC
GCGATCGGTA CCGGCGTGAT CGGCGGGATG TTGACGGCGA CCTTCCTCGC CATTTTCATG
ATCCCGATGT TCTTCGTCGT GATCCGCGCG AAATTCGGCG GTGAAAAGGA AGACCCGGAT
GAGGCGCTCG CACACTACAA CCAGCACCAT CCGCATGACG GCCAGGGCGG CGGTTCGGCG
GGCGGGTCGG CTGATGAAGG CTCGGGCAAG GACGGACATT GA
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| Protein sequence | MAKFFIDRPI FAWVIAIILM LAGIASVFTL PIAQYPTIAP PAVQISATYP GASAKTVENT
VTQVIEQQMS GLDHLLYLSS TSDDSGTATI TLTFAAGTNP DIAQVQVQNK LQLATPLLPQ
AVQQLGTKVT KSSSSFLLVM AFVSEDGSMN KYDLANYVAS NIQDPVSRID GVGTVTLFGS
QYAMRIWLDA NKLTNFGLTP VDVETALQAQ NVQVAGGSLG GTPSVPGQVL QATITEATLL
NTPEQFGNVL LKVNQDGSRV RIKDVARIEL GGENYNFDTK YNGQPTAGFG IQLATGANAL
ATAKAVRAKV AELSKYFPHG LVVQYPYDTT PFVRLSIEEV VKTLLEGIVL VFLVMYLFLQ
NLRATLIPTI AVPVVLLGTF AIMGLVGFSI NTLSMFGLVL AIGLLVDDAI VVVENVERVM
QEEGLSPRDA TRKAMDQITG ALVGVALVLS AVFVPVAFSG GSVGAIYRQF SLTIVAAMVL
SVLVALILTP ALCATILKPI EQGHQEKTTG FFGWFNRTFN KSRDKYHSGV HHVIKRSGRW
LIIYMVVIFA VGLLFVKLPK SFLPDEDQGT MFVLVQTPSG STQETTARAL KDVSDYLLNT
EKSIVESTFT VNGFSFAGRG QNAGLVFVRM KDYAQRQHSD QKVQALVGRL FMHFGSYKNA
LVYPVNPPSI PELGTAAGFD FELQDRAGVG HEKLMEARNM LLGMAAKDPT LAQVRPNGLN
DTPQFKVDID HEKASALGVS LSAIDQTFSI AWASQYVNNF LDTDGRIKKV YLQGDAPFRM
TPEDLNAWYV RNSAGGMVPF SSFASGTWTY GSPKLERYNG ISAVEIQGAA APGKSTGQAM
TAMEALVAKL PAGVGYEWTG LSLQERQSGS QAPILYGISI LVVFLCLAAL YESWSIPFSV
IMVVPLGVIG ALLAATLRGL ENDVFFQVGL LTTVGLSAKN AILIVEFARE LQQGEGMGPI
EAALEAARLR LRPILMTSLA FILGVMPLAI SNGAGSASQH AIGTGVIGGM LTATFLAIFM
IPMFFVVIRA KFGGEKEDPD EALAHYNQHH PHDGQGGGSA GGSADEGSGK DGH
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