| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bphyt_3256 |
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| Symbol | |
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| ID | 6282394 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia phytofirmans PsJN |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010681 |
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| Strand | - |
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| Start bp | 3667387 |
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| End bp | 3668964 |
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| Gene Length | 1578 bp |
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| Protein Length | 525 aa |
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| Translation table | 11 |
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| GC content | 64% |
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| IMG OID | 642622829 |
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| Product | RND efflux system, outer membrane lipoprotein, NodT family |
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| Protein accession | YP_001896871 |
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| Protein GI | 187925229 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis
[U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG1538] Outer membrane protein |
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| TIGRFAM ID | [TIGR01845] efflux transporter, outer membrane factor (OMF) lipoprotein, NodT family |
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Plasmid Coverage information |
| Num covering plasmid clones | 17 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 30 |
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| Fosmid unclonability p-value | 0.865648 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCAAAAAC ACTCTCTGAT TGCAGTGGCG GTCGCGCTGT TCGCCGCGGG TTGCACGATG
GCGCCGAAGT ACGAGCGCCC GGCGCCACCC ACGACGAGCA CCTTCCCGAC CGGCGGCGTG
TACGACACGC AACCGGGCGC GACCCAGCCG GGCGCGGGCC AGACCGACGC GACCCAGACG
GGCAAGCAGC AGCCCGGCGC GACGAACGCG GCGCGCAGCG CGAACGGCCA GGCCGCGGTG
GATATCGGCT GGCGCGATTT CTTCGTCGAT CCGCGCATGC AGCGGTTGAT CGAGATCGCG
CTGAAGAACA ACCGCGATCT GCGCGTGTCG GTGCTGAACA TGCAGGCGTC GGCGGCGCAG
TATCGGATCG TTCGCGCCGG TCTGCTGCCG ACGCTCGACG CCGCGGCTTC GCAAAGCAAG
CAACGTACGC CAAAGAATCT GTCATTCGCG GGGCAGACGA TTACCAACAC GTATTCGGTC
GGTCTGAACG CGTCCTGGGA AATCGACTTC TTCGGGCGGA TTCAGAGCTT GAAGGATCAG
GCGTTGGCGC AGTACCTGGC TACGGCTCAG GCGCGCAAGG CGGCGGAAAT CTCGCTGGTC
TCGCAGGTCG CGACCCAGTA CATGACCGTG CTCGAGCTCG ACGATCTGTT GAAAGTCACG
CAGAACACGC TGAAGACCTC GCAGGAATCG TATCGGATCG CCAAGTTGCA GTTCGACAAC
GGCACCGGTT CGGAGCTGGA TCTGCGTCAG TCGCAAACCG TGGTCGAGCA GGCTCAGGCC
AACCTGCAGC AGCAGATGCG TCTGCGGGCG CAAGCGGATA ACGCGCTCGT GCTGCTGATC
GGCGAGCCGC TGCCGGACGA TCTGCCGCCG GGCATGACGC TGGACAACCA GAATCTGCTC
ACGGATATTC CGGCGGGTCT GCCGTCCGAC CTGCTGACGC GCCGTCCGGA CATCATGGAG
GCCGAAGAGA ATCTGCTGGC CGCCAACGCG AACATTGGCG CGGCGCGCGC GGCGTTCTTC
CCGAAGGTCT CGCTGACCGG CAGCTTCGGC ACGCTCAGCC CGTCGCTCGG CGGTTTGTTC
AAGCCGGGTT CGGCGGCGTG GAGCTTCGCG CCGTCGATCA CGCTGCCGAT CTTCGAGGGC
GGGCAGAATC TCGCCAACCT CGATCTCGCC AACATCCAGA AGAAAGTCCA GATCGCCACG
TATGAAAAAG CGATCCAGTC GGCCTTCCGC GATGTGGCGG ACGCGCTGGC AGCGCGTGGC
ACGTACGATC AGCAGATCCA GGCGCTGGAG CGCAATACTT TTGCCGAACA GCGCCGGCTG
GATCTGTCGA ACCTGCGTTA TACGAATGGT GTCGACAGCT ATCTGACCGT GCTGACCGCG
CAGACCGATC TGTATTCGTC GCAGCAGTTG CTGGTCACGG CCCGCATGGA GCGTCTGCAG
AACCTAGTGA CGTTGTATCA GGTACTCGGC GGCGGCTGGA TTGAACACAA CGGCGATCAG
CCGCGTCCGG CCGATGCACC GGTCGATTAC GGTGCGGCAA GCGCGCCGGT GGCGGCTTCG
GCGGCCACGG CGGGTTGA
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| Protein sequence | MQKHSLIAVA VALFAAGCTM APKYERPAPP TTSTFPTGGV YDTQPGATQP GAGQTDATQT
GKQQPGATNA ARSANGQAAV DIGWRDFFVD PRMQRLIEIA LKNNRDLRVS VLNMQASAAQ
YRIVRAGLLP TLDAAASQSK QRTPKNLSFA GQTITNTYSV GLNASWEIDF FGRIQSLKDQ
ALAQYLATAQ ARKAAEISLV SQVATQYMTV LELDDLLKVT QNTLKTSQES YRIAKLQFDN
GTGSELDLRQ SQTVVEQAQA NLQQQMRLRA QADNALVLLI GEPLPDDLPP GMTLDNQNLL
TDIPAGLPSD LLTRRPDIME AEENLLAANA NIGAARAAFF PKVSLTGSFG TLSPSLGGLF
KPGSAAWSFA PSITLPIFEG GQNLANLDLA NIQKKVQIAT YEKAIQSAFR DVADALAARG
TYDQQIQALE RNTFAEQRRL DLSNLRYTNG VDSYLTVLTA QTDLYSSQQL LVTARMERLQ
NLVTLYQVLG GGWIEHNGDQ PRPADAPVDY GAASAPVAAS AATAG
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