Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Bphyt_3234 |
Symbol | |
ID | 6283528 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Burkholderia phytofirmans PsJN |
Kingdom | Bacteria |
Replicon accession | NC_010681 |
Strand | - |
Start bp | 3642516 |
End bp | 3643523 |
Gene Length | 1008 bp |
Protein Length | 335 aa |
Translation table | 11 |
GC content | 62% |
IMG OID | 642622807 |
Product | Monosaccharide-transporting ATPase |
Protein accession | YP_001896849 |
Protein GI | 187925207 |
COG category | [G] Carbohydrate transport and metabolism |
COG ID | [COG1172] Ribose/xylose/arabinose/galactoside ABC-type transport systems, permease components |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 14 |
Plasmid unclonability p-value | 0.197254 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 37 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAACACCC CTAATCCTTC TTCTTCACCC AAGACCTCCA CTGTCAACAG CGATACGCCG GGCGCGCCGG TGCGTTTCAC GTGGGCCGCA TTGAAACGCT CCACGCTGTT CTATCCGTTC ATCGGCTTGC TGGTGGTCTG CATCGTGATG GTGTTCGCGA GCGATAGTTT TCTCTCCGGG GCGAACATCG AGAACGTGCT GCGCCAGGTG TCGATCAACG CGATCATCGC CGTGGGGATG ACGTGCGTGA TTTTGACCGG CGGTATCGAT CTTTCCGTGG GCTCCGTCAT GGCGCTGGCG GGCACGCTCG CCGCGGGCTT GATGGTGGCC GGCATGAATG CGGTCGCCGC TCTGGCAATT GGTATTGCAG TCGGCCTCGG CTTCGGCGCG GCGAACGGTT TTTTCGTGGC CTTTGCCGGC ATGCCGCCGA TCATCGTCAC GCTCGCGACG ATGGGCATCG CGCGTGGCCT CGCGCTGATC TACACGGGCG GCTATCCGAT CGACGGCTTG CCGGACTGGG TGAGCTTTTT CGGCAGCGGC AAGATTCTCG GCGTGCAGGC GCCCGTCGTG ATCATGGCGG TGATCTATGT GATCGCGTGG GTGCTGCTGG AGCGCATGCC GTTCGGCCGC TATGTCTATG CGATCGGCGG CAACGAACAG GCCACGCGTC TATCCGGCGT GCGCGTGGCG CGCGTCAAGC TGATCGTCTA CACGATCGCC GGTTTGACGT CCGCCTTCGC CGCCATTGTG TTGACCGCGC GTTTGATGAG CGGGCAGCCG AACGCCGGCG TCGGCTTCGA ACTCGACGCC ATCGCCGCCG TGGTGATGGG CGGCACGTCG ATCTCCGGCG GCCGCGGTTC GATCATCGGC ACGTTGATCG GCGCGCTGCT GCTCGGTGTG TTGAACAACG GCCTGAACAT GGTCGGCGTG AATCCGTATG TGCAGAACGT GATCAAGGGC GGAATCATTT TGCTCGCGAT TTACATCAGC CGCGACCGCA GAAAGTAA
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Protein sequence | MNTPNPSSSP KTSTVNSDTP GAPVRFTWAA LKRSTLFYPF IGLLVVCIVM VFASDSFLSG ANIENVLRQV SINAIIAVGM TCVILTGGID LSVGSVMALA GTLAAGLMVA GMNAVAALAI GIAVGLGFGA ANGFFVAFAG MPPIIVTLAT MGIARGLALI YTGGYPIDGL PDWVSFFGSG KILGVQAPVV IMAVIYVIAW VLLERMPFGR YVYAIGGNEQ ATRLSGVRVA RVKLIVYTIA GLTSAFAAIV LTARLMSGQP NAGVGFELDA IAAVVMGGTS ISGGRGSIIG TLIGALLLGV LNNGLNMVGV NPYVQNVIKG GIILLAIYIS RDRRK
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