Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Bphyt_3232 |
Symbol | |
ID | 6280900 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Burkholderia phytofirmans PsJN |
Kingdom | Bacteria |
Replicon accession | NC_010681 |
Strand | - |
Start bp | 3639790 |
End bp | 3641334 |
Gene Length | 1545 bp |
Protein Length | 514 aa |
Translation table | 11 |
GC content | 62% |
IMG OID | 642622805 |
Product | Xylulokinase |
Protein accession | YP_001896847 |
Protein GI | 187925205 |
COG category | [G] Carbohydrate transport and metabolism |
COG ID | [COG1070] Sugar (pentulose and hexulose) kinases |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 12 |
Plasmid unclonability p-value | 0.189507 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 35 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGATTACG TCATCGGCGT CGATATCGGC ACGCAGAGCA CCAAGGCGCT GCTGGTCGAT CAGCACGGCG CGATCGTCGC GCAGCATGCG TCGAGCTATC AGCCGGATAC GCCCAAGCCG CTGTGGGCCG AACAATGGCC CGCGGTCTGG TTGAAGGCGG TGGTGGAGTG CATCGCTGCA TGCGTTGCCA AGGCGAAGGA GGCGGGCGTC GCGGCGAAGT CGATTAAAGC CGTCTGCGTG AGCAGCCTGT ATGGTGGTTC CGGTATTCCG GTGGATAGCG AGATGCGGCC GCTGTATCCC TGTTTGATCT GGATGGATCG GCGCGCCACT GAGCAGGTCG AATGGGTGCG CAACAACGTC GATCTCGAAC GGCTCTATAC GATCACCGGC AACGGCGTGG ATAGTTACTA TGGCTACACG AAAATGCTGT GGCTGCGCGA TCACGAACCC GACGTGTGGT CACATACGCG ATATTTCCTG CCGCCGAATG CGTACGTGAT TTACATGCTG ACTGGTGAGG TGGCGGTCGA TCATAGTTCG GCGGGCAATA TCGGCGGCAT CTACGACATT GGCAAACGCG ACTGGTCCGA CGAAGCGCTC GACATGCTCG GCATTCCCGC GACGATGATG CCGGAGCGGC TGGTCGAATC GTCGGACGTG GTAGGCGGCT TGCTATCGCA GTGGGTCGAG CAGCTCGGTC TCGACGCGGG CACGGCGATC GTCGCGGGTG GCGTGGACGC TGCGATGGCG ACATTCGCGG CCGGCGTCAC GCGCGCCGGG CAACATGTCG CGATGATCGG CACGAGCATG TGCTGGGGCT ATATCAACCA GACCGTCGAC GCGCGGCATG GCTTGATCAG CATGCCGCAT GTGTTCAATG GTCAGCGCGA TATTTATGTG TTCGGCGGGG CGATTACGGC GGGCGCGTCG GTGACCTGGT ATCGCGAGCA GTTCTGTCAC GCGGAGATCG AGGCCGCGCG CGCGACGCCG CATGGCGATC CGCATCGCTT GCTGGAAGAG TCGGCAGAGA AGGTGCCGGC CGGCTCGGAT GGCGTGATGT TTCTGCCGTA TCTGATGGGC GAGCGTAGCC CGGTGTGGGA TGCGAAGGCG AGTGGTGCGT TCGTCGGGCT GAGCCTGTTT CATACGCGCG CGCATTTGTA TCGCGCGGTG CTGGAGGGCG TCACGTTTGC GTTGAAGCAC AACATCGAGG CGGGGCGCAA AGGCGCGCAG TCACTGGACG ACAAACTGAT CGTGGTGGGC GGCGCCGCGC ATTCGGATCT GTGGATGCAG ATTATCGCGG ACGTCACCGG GTATCCGGTT TATACCATCG AGCAGGACGT GGAGGCGGCG ATGGGGGCTG CTTTGCTGGC GGCTGTCGGT GTCGGGCTGG TGTCGCGTGA AGAGGCGCAG AGCGGATGGG TCACGCTGGT TGAACGCGCG GAGCCGAACG CACAACGCAT GGCGTTGTAC GAGCAACGGT TCGGCGTTTA TACGGATTTG TACCCGGCGT TGAAGCCGGT CATGCATCGG TTGCAGACAT CATGA
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Protein sequence | MDYVIGVDIG TQSTKALLVD QHGAIVAQHA SSYQPDTPKP LWAEQWPAVW LKAVVECIAA CVAKAKEAGV AAKSIKAVCV SSLYGGSGIP VDSEMRPLYP CLIWMDRRAT EQVEWVRNNV DLERLYTITG NGVDSYYGYT KMLWLRDHEP DVWSHTRYFL PPNAYVIYML TGEVAVDHSS AGNIGGIYDI GKRDWSDEAL DMLGIPATMM PERLVESSDV VGGLLSQWVE QLGLDAGTAI VAGGVDAAMA TFAAGVTRAG QHVAMIGTSM CWGYINQTVD ARHGLISMPH VFNGQRDIYV FGGAITAGAS VTWYREQFCH AEIEAARATP HGDPHRLLEE SAEKVPAGSD GVMFLPYLMG ERSPVWDAKA SGAFVGLSLF HTRAHLYRAV LEGVTFALKH NIEAGRKGAQ SLDDKLIVVG GAAHSDLWMQ IIADVTGYPV YTIEQDVEAA MGAALLAAVG VGLVSREEAQ SGWVTLVERA EPNAQRMALY EQRFGVYTDL YPALKPVMHR LQTS
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