Gene Bphyt_3232 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBphyt_3232 
Symbol 
ID6280900 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia phytofirmans PsJN 
KingdomBacteria 
Replicon accessionNC_010681 
Strand
Start bp3639790 
End bp3641334 
Gene Length1545 bp 
Protein Length514 aa 
Translation table11 
GC content62% 
IMG OID642622805 
ProductXylulokinase 
Protein accessionYP_001896847 
Protein GI187925205 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG1070] Sugar (pentulose and hexulose) kinases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones12 
Plasmid unclonability p-value0.189507 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones35 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGATTACG TCATCGGCGT CGATATCGGC ACGCAGAGCA CCAAGGCGCT GCTGGTCGAT 
CAGCACGGCG CGATCGTCGC GCAGCATGCG TCGAGCTATC AGCCGGATAC GCCCAAGCCG
CTGTGGGCCG AACAATGGCC CGCGGTCTGG TTGAAGGCGG TGGTGGAGTG CATCGCTGCA
TGCGTTGCCA AGGCGAAGGA GGCGGGCGTC GCGGCGAAGT CGATTAAAGC CGTCTGCGTG
AGCAGCCTGT ATGGTGGTTC CGGTATTCCG GTGGATAGCG AGATGCGGCC GCTGTATCCC
TGTTTGATCT GGATGGATCG GCGCGCCACT GAGCAGGTCG AATGGGTGCG CAACAACGTC
GATCTCGAAC GGCTCTATAC GATCACCGGC AACGGCGTGG ATAGTTACTA TGGCTACACG
AAAATGCTGT GGCTGCGCGA TCACGAACCC GACGTGTGGT CACATACGCG ATATTTCCTG
CCGCCGAATG CGTACGTGAT TTACATGCTG ACTGGTGAGG TGGCGGTCGA TCATAGTTCG
GCGGGCAATA TCGGCGGCAT CTACGACATT GGCAAACGCG ACTGGTCCGA CGAAGCGCTC
GACATGCTCG GCATTCCCGC GACGATGATG CCGGAGCGGC TGGTCGAATC GTCGGACGTG
GTAGGCGGCT TGCTATCGCA GTGGGTCGAG CAGCTCGGTC TCGACGCGGG CACGGCGATC
GTCGCGGGTG GCGTGGACGC TGCGATGGCG ACATTCGCGG CCGGCGTCAC GCGCGCCGGG
CAACATGTCG CGATGATCGG CACGAGCATG TGCTGGGGCT ATATCAACCA GACCGTCGAC
GCGCGGCATG GCTTGATCAG CATGCCGCAT GTGTTCAATG GTCAGCGCGA TATTTATGTG
TTCGGCGGGG CGATTACGGC GGGCGCGTCG GTGACCTGGT ATCGCGAGCA GTTCTGTCAC
GCGGAGATCG AGGCCGCGCG CGCGACGCCG CATGGCGATC CGCATCGCTT GCTGGAAGAG
TCGGCAGAGA AGGTGCCGGC CGGCTCGGAT GGCGTGATGT TTCTGCCGTA TCTGATGGGC
GAGCGTAGCC CGGTGTGGGA TGCGAAGGCG AGTGGTGCGT TCGTCGGGCT GAGCCTGTTT
CATACGCGCG CGCATTTGTA TCGCGCGGTG CTGGAGGGCG TCACGTTTGC GTTGAAGCAC
AACATCGAGG CGGGGCGCAA AGGCGCGCAG TCACTGGACG ACAAACTGAT CGTGGTGGGC
GGCGCCGCGC ATTCGGATCT GTGGATGCAG ATTATCGCGG ACGTCACCGG GTATCCGGTT
TATACCATCG AGCAGGACGT GGAGGCGGCG ATGGGGGCTG CTTTGCTGGC GGCTGTCGGT
GTCGGGCTGG TGTCGCGTGA AGAGGCGCAG AGCGGATGGG TCACGCTGGT TGAACGCGCG
GAGCCGAACG CACAACGCAT GGCGTTGTAC GAGCAACGGT TCGGCGTTTA TACGGATTTG
TACCCGGCGT TGAAGCCGGT CATGCATCGG TTGCAGACAT CATGA
 
Protein sequence
MDYVIGVDIG TQSTKALLVD QHGAIVAQHA SSYQPDTPKP LWAEQWPAVW LKAVVECIAA 
CVAKAKEAGV AAKSIKAVCV SSLYGGSGIP VDSEMRPLYP CLIWMDRRAT EQVEWVRNNV
DLERLYTITG NGVDSYYGYT KMLWLRDHEP DVWSHTRYFL PPNAYVIYML TGEVAVDHSS
AGNIGGIYDI GKRDWSDEAL DMLGIPATMM PERLVESSDV VGGLLSQWVE QLGLDAGTAI
VAGGVDAAMA TFAAGVTRAG QHVAMIGTSM CWGYINQTVD ARHGLISMPH VFNGQRDIYV
FGGAITAGAS VTWYREQFCH AEIEAARATP HGDPHRLLEE SAEKVPAGSD GVMFLPYLMG
ERSPVWDAKA SGAFVGLSLF HTRAHLYRAV LEGVTFALKH NIEAGRKGAQ SLDDKLIVVG
GAAHSDLWMQ IIADVTGYPV YTIEQDVEAA MGAALLAAVG VGLVSREEAQ SGWVTLVERA
EPNAQRMALY EQRFGVYTDL YPALKPVMHR LQTS