| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bphyt_3227 |
|---|
| Symbol | |
|---|
| ID | 6280895 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Burkholderia phytofirmans PsJN |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010681 |
|---|
| Strand | + |
|---|
| Start bp | 3635343 |
|---|
| End bp | 3635981 |
|---|
| Gene Length | 639 bp |
|---|
| Protein Length | 212 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 68% |
|---|
| IMG OID | 642622801 |
|---|
| Product | arylformamidase |
|---|
| Protein accession | YP_001896843 |
|---|
| Protein GI | 187925201 |
|---|
| COG category | [R] General function prediction only |
|---|
| COG ID | [COG1878] Predicted metal-dependent hydrolase |
|---|
| TIGRFAM ID | [TIGR03035] arylformamidase |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 25 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 37 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGCCAACAC TTTGGGACAT CACCCCTGCC GTCGATACCG CCACGCCCGT CTGGCCCGGC
GACACGCCGG TGGGCATCGA GCGCGTGTGG CGCATGGAGG CGGGCTCGCC CGTCAACGTC
GCGCGGCTGA CGCTGTCGCC GCACACCGGC GCGCACACCG ATGCCCCGCT GCACTATGAC
GCCGAAGGCG TGGCCATCGG CGAAGTGCCG CTCGACGCGT ACCTCGGCCG ATGCCGCGTG
ATTCATTGCA TCGGCGCATC GCCTGTTGTG ACGCCACAAC ACCTGAGCGG CTCGCTCGAC
GACCTGCCGC CGCGAGTCTT ACTGCGCACT TACAGAAACG CGCCGACCGC AGCGTGGGAC
AGCGCTTTCT GCGCTGTTGC GCCGGACACC ATCGACCTGC TGGCGGCACG CGGCGTGAAG
CTGATCGGCA TCGACACGCC CTCGCTCGAC CCGCAGGAAT CGAAGACGAT GGATGCGCAC
CACCGGATCC GCACGCATCG CATGGCGATT CTCGAAGGCA TCGTTCTCGA CGACGTCGCG
CCCGGCGACT ACGAACTGAT CGCGCTGCCG CTCAAGCTGA CCACACTCGA CGCAAGCCCG
GTGCGCGCGA TCCTGCGCGC GCTGCCGGAA TCGCAATGA
|
|---|
| Protein sequence | MPTLWDITPA VDTATPVWPG DTPVGIERVW RMEAGSPVNV ARLTLSPHTG AHTDAPLHYD
AEGVAIGEVP LDAYLGRCRV IHCIGASPVV TPQHLSGSLD DLPPRVLLRT YRNAPTAAWD
SAFCAVAPDT IDLLAARGVK LIGIDTPSLD PQESKTMDAH HRIRTHRMAI LEGIVLDDVA
PGDYELIALP LKLTTLDASP VRAILRALPE SQ
|
|---|
| |