Gene Bphyt_3221 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBphyt_3221 
Symbol 
ID6282193 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia phytofirmans PsJN 
KingdomBacteria 
Replicon accessionNC_010681 
Strand
Start bp3629796 
End bp3630437 
Gene Length642 bp 
Protein Length213 aa 
Translation table11 
GC content59% 
IMG OID642622795 
Productpyridoxamine 5'-phosphate oxidase 
Protein accessionYP_001896837 
Protein GI187925195 
COG category[H] Coenzyme transport and metabolism 
COG ID[COG0259] Pyridoxamine-phosphate oxidase 
TIGRFAM ID[TIGR00558] pyridoxamine-phosphate oxidase 


Plasmid Coverage information

Num covering plasmid clones10 
Plasmid unclonability p-value0.0110352 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones34 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACCTCAC TCGCCGAACT TCGAAAAAAC TATTCGCTGG GTTCTTTGGA CGTTGCCGAT 
ATCGACCGTA ACCCGTTTCG TCAATTCGAT ACGTGGTTTC AACAAGCGGT CGACGCCAAA
TTGCCCGAAC CGAATACCAT GACGCTGGCC ACGGTCGACT CGCGTGGCCG GCCGTCGGCG
CGTATTGTCC TGATCAAGGG CGTCGACGAG CGGGGCTTCG TGTTCTTCAC CAATTACGAA
AGCCGTAAAG GCCGTGAACT GGCCGCCAAT CCGTACGCCA GCCTGCTTTT CTACTGGATC
GAACTCGAAC GCCAGGTGCG TGTGGAAGGC CGCATCGTCA AAACCAGCGC GGAAGAAAGC
GACGCGTATT TCGCATCGCG CCCGCTCGGT TCACGCATCG GTGCATGGGC CTCGAATCAG
AGTCAGCTAA TTGAAAGCCG TTCGCAGCTC GAAACACGCG AACGCGAAAT CAGCTTGCAA
TACGGCGACC AGCCACCGCG CCCACCGCAC TGGGGCGGGT ATCGTTTGGT GCCCGAAGCA
ATCGAATTCT GGCAGGGCCG GCCGTCACGC CTTCACGACC GCTTGCTCTA CACGCGCTCA
GACGAACACA GCGACTGGCA AATCTCCCGC CTATCGCCTT GA
 
Protein sequence
MTSLAELRKN YSLGSLDVAD IDRNPFRQFD TWFQQAVDAK LPEPNTMTLA TVDSRGRPSA 
RIVLIKGVDE RGFVFFTNYE SRKGRELAAN PYASLLFYWI ELERQVRVEG RIVKTSAEES
DAYFASRPLG SRIGAWASNQ SQLIESRSQL ETREREISLQ YGDQPPRPPH WGGYRLVPEA
IEFWQGRPSR LHDRLLYTRS DEHSDWQISR LSP