Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Bphyt_3200 |
Symbol | |
ID | 6281252 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Burkholderia phytofirmans PsJN |
Kingdom | Bacteria |
Replicon accession | NC_010681 |
Strand | + |
Start bp | 3607779 |
End bp | 3608537 |
Gene Length | 759 bp |
Protein Length | 252 aa |
Translation table | 11 |
GC content | 65% |
IMG OID | 642622774 |
Product | short-chain dehydrogenase/reductase SDR |
Protein accession | YP_001896816 |
Protein GI | 187925174 |
COG category | [I] Lipid transport and metabolism [Q] Secondary metabolites biosynthesis, transport and catabolism [R] General function prediction only |
COG ID | [COG1028] Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 12 |
Plasmid unclonability p-value | 0.0454791 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 33 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGAGATTC GTGACAACGT TTTCCTGATC ACCGGCGGTG CATCGGGACT GGGCGCAGCC ACGGCACGGC TGTTCGTCGA AAACGGCGGC AAAGTGGTGC TCGCCGACCT GAACGTGGAT GCCGGCGAAG CGCTCGCCAA GGAACTCGGC GGTGTGTTCG TCAGATGCGA CGTGAGCCGC GAAGACGACG CCACCCAGGC CGTTGAAGCC GCCACCAAGC TCGGCACGCT GCGCGGTCTG GTCAATTGTG CGGGCGTCGC GCCGGCCGTC AAAACAGTCG GCAAGGACGG CCCCCATCCG CTCGACGCGT TCGCGCGCAC CATCTCGATC AATCTGATCG GCACCTTCAA CATGGTCCGG CTCGCCGCCG CGGCCATGTC GAAGAACGAG CCGAACGCGA ATGGCGAGCG CGGCGTGATC ATCAACACGG CGTCGGTGGC CGCGTTTGAC GGTCAGATCG GCCAGGCGGC TTATGCGGCA TCCAAGGCCG GCGTGGCCGG CATGACGCTG CCCATCGCTC GCGACCTTTC GCGCAACGCG ATCCGCGTGA TGACGATCGC ACCGGGCATT TTCGAAACGC CCATGCTGCT CGGCATGCCG CAGGAAGTGC AAGACGCCCT TGGCGCGATG GTGCCGTTCC CGCCGCGTCT CGGCAAACCG GTCGAATACG CGATGCTGGC CAAGCAGATC TTCGACAATC CGATGCTCAA CGGCGAAGTG ATTCGTCTGG ACGGCGCGAT CCGGATGCAG CCGAAGTAA
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Protein sequence | MEIRDNVFLI TGGASGLGAA TARLFVENGG KVVLADLNVD AGEALAKELG GVFVRCDVSR EDDATQAVEA ATKLGTLRGL VNCAGVAPAV KTVGKDGPHP LDAFARTISI NLIGTFNMVR LAAAAMSKNE PNANGERGVI INTASVAAFD GQIGQAAYAA SKAGVAGMTL PIARDLSRNA IRVMTIAPGI FETPMLLGMP QEVQDALGAM VPFPPRLGKP VEYAMLAKQI FDNPMLNGEV IRLDGAIRMQ PK
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