| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bphyt_3191 |
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| Symbol | |
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| ID | 6281275 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia phytofirmans PsJN |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010681 |
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| Strand | + |
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| Start bp | 3597175 |
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| End bp | 3598611 |
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| Gene Length | 1437 bp |
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| Protein Length | 478 aa |
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| Translation table | 11 |
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| GC content | 62% |
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| IMG OID | 642622765 |
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| Product | protein of unknown function DUF88 |
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| Protein accession | YP_001896807 |
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| Protein GI | 187925165 |
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| COG category | [S] Function unknown |
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| COG ID | [COG1432] Uncharacterized conserved protein |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 4 |
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| Plasmid unclonability p-value | 0.000122431 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
| Num covering fosmid clones | 25 |
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| Fosmid unclonability p-value | 0.16823 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGCGTCAT CCAACGAAAC CGTCAGCATG GCGCTATTCT GCGACTTCGA AAACGTCGCA
CTCGGCGTGC GCGACGCGAA GTACGACAAG TTCGATATCA AGCTGGTGCT CGAACGTCTG
CTGCTCAAGG GCAGCATCGT CGTGAAGAAA GCGTATTGCG ACTGGGATCG CTACAAGAGT
TTCAAAGGCG CGATGCACGA GGCCAATTTC GAATTGATCG AGATTCCCCA CGTGCGCCAA
TCGGGCAAAA ATTCCGCCGA TATCCGGCTC GTGGTCGACG CGCTCGACCT CTGCTACACG
AAATCGCACG TCAATACGTT CGTGATCATC AGCGGCGACT CGGATTTTTC GCCGCTGGTG
TCGAAGCTGC GTGAGAACGC GAAGCAGGTG ATCGGCGTTG GCGTGCAGCA ATCCACGTCG
GATCTGCTGA TCGCGAACTG CGACGAGTTC TTCTTTTATG ACGACCTCGT GCGCGAGAGT
CAGCGCACGG TCGCCAAGCG CGAGTCGTCG CGCCCGCAAC AGTCCGCCCA GCCGGCGGCC
AAGCGTGCGC CCGACGAGGA GAAGACCCGC AATAAGGAAG ACCTCGAAAA ACGCCGCACC
AAGGCGGTCG AGATCGCGGT GCAAACGTTC GACGCGCTCG CCTCCGAACG CGGCGACAGC
GGCAAGATCT GGGCGTCGGT GCTGAAGAAC GCAATCAAGC GCCGCAAGCC GGATTTCAAC
GAGACGTACT ACGGCTTTCG CGCTTTCGGC AATCTGCTCG AAGAAGCGCA TGCTCGCGGG
CTGCTCGAGT TCGGCCGCGA CGAGAAGTCC GGCGCGTATG TCTATCGGAG CACGGCTGCG
AACGTGGCCG GCGACAACAC GGGCGAGCCC GCTGAAATCG TCGAATCGGC GGAACAGTTG
TATGAGGCGC AGGTCGCGGA AACGGTGATC GCCGAGTCTG GCGGCAAACA CGAGTCGCGC
CGTCGGGGGC GAGGCAATCG CAAAGCAGGA CGCGGCCAAC AGGAGACCGT TCACGAAGAG
CGTACGGCCG TCGAACAGAG CGGCAGCGCT CAACCTGGAA CGGACGAAGC GCACGCGCAA
ACGCCGGAAA ATGCCCAGTT CATTTTTGAG CTGCCGGAAG CACCTTGGTC GGAACCGGAA
ACCGTGACGG CCGAAGAACT GGACACTTCC GAAAGCCCGC CAGACGAGCG GGATACAAGC
GCGAGGCAGC CCAAGCGCCG CAATGAACGC GCGCCACGCA AGACGGCTGC AAAGAAAGCG
AAGAAGGCCG CGCCGCGAAG CATCGACGAC ATTCCGGAGA TCGCAGCGCC TGCTGAGGCG
CCGGCCGCGA CTGCCGCAGC GGAAGAAGCG CCCGCGCCCG CAAAAAAGGC CGCGCGCAAA
ACTGCGGCGC GCAGTCGTCG TCCGCGTAAG ACCGCCGCGA CGAGCGACGC GGAGTGA
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| Protein sequence | MASSNETVSM ALFCDFENVA LGVRDAKYDK FDIKLVLERL LLKGSIVVKK AYCDWDRYKS
FKGAMHEANF ELIEIPHVRQ SGKNSADIRL VVDALDLCYT KSHVNTFVII SGDSDFSPLV
SKLRENAKQV IGVGVQQSTS DLLIANCDEF FFYDDLVRES QRTVAKRESS RPQQSAQPAA
KRAPDEEKTR NKEDLEKRRT KAVEIAVQTF DALASERGDS GKIWASVLKN AIKRRKPDFN
ETYYGFRAFG NLLEEAHARG LLEFGRDEKS GAYVYRSTAA NVAGDNTGEP AEIVESAEQL
YEAQVAETVI AESGGKHESR RRGRGNRKAG RGQQETVHEE RTAVEQSGSA QPGTDEAHAQ
TPENAQFIFE LPEAPWSEPE TVTAEELDTS ESPPDERDTS ARQPKRRNER APRKTAAKKA
KKAAPRSIDD IPEIAAPAEA PAATAAAEEA PAPAKKAARK TAARSRRPRK TAATSDAE
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