| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bphyt_3190 |
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| Symbol | |
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| ID | 6281274 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia phytofirmans PsJN |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010681 |
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| Strand | + |
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| Start bp | 3596284 |
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| End bp | 3596931 |
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| Gene Length | 648 bp |
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| Protein Length | 215 aa |
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| Translation table | 11 |
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| GC content | 61% |
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| IMG OID | 642622764 |
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| Product | ATP-dependent Clp protease, proteolytic subunit ClpP |
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| Protein accession | YP_001896806 |
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| Protein GI | 187925164 |
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| COG category | [O] Posttranslational modification, protein turnover, chaperones
[U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG0740] Protease subunit of ATP-dependent Clp proteases |
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| TIGRFAM ID | [TIGR00493] ATP-dependent Clp protease, proteolytic subunit ClpP |
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Plasmid Coverage information |
| Num covering plasmid clones | 12 |
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| Plasmid unclonability p-value | 0.0240901 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 25 |
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| Fosmid unclonability p-value | 0.141091 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGCATTCCA ACTATCCAAA CATTACGGGC CTCGGCCTCG TGCCCACCGT GATCGAGCAG
TCGGGCCGCG GCGAGCGCGC CTACGACATC TATTCGCGTT TGCTGCGCGA GCGCATCGTG
TTCCTGGTCG GGCCCGTGAA CGAGCAATCG GCCAGTCTGA TTGTCGCGCA GTTGCTGTTT
CTCGAGTCCG AGAATCCCGA CAAGGATATT TGTTTTTACA TCAATTCGCC GGGCGGTTCG
GTGTATGACG GCCTCGCGAT CTACGACACC ATGCAGTTCA TCAAACCGGA GGTGTCGACT
CTGTGCACCG GCTTTGCCGC AAGCATGGGC ACCTTTCTGC TGACCGCGGG TCAGCGTGGC
AAACGGTATG CGCTGCCCAA CGCGCGCATC ATGATTCACC AGCCGTCAGG CGGCAGCCAG
GGCACGGCGG CGGACGTCGA GATTCAGGCG AAGGAGGTGC TCTATTTGCG AGAGCGGCTG
AACGCCATGA TGGCGGAGCG CACCGGGCGC AGCATCGAGG CAATCGCTCG CGACACCGAC
CGCGACAATT TCATGTCAGC GCAGTCCGCG AAGACGTACG GTCTCGTCGA CGAGGTGCTG
GAGACACGCG CTGCGCTGAA TGTCGCGCCG TATCACATGG ATAAGTAG
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| Protein sequence | MHSNYPNITG LGLVPTVIEQ SGRGERAYDI YSRLLRERIV FLVGPVNEQS ASLIVAQLLF
LESENPDKDI CFYINSPGGS VYDGLAIYDT MQFIKPEVST LCTGFAASMG TFLLTAGQRG
KRYALPNARI MIHQPSGGSQ GTAADVEIQA KEVLYLRERL NAMMAERTGR SIEAIARDTD
RDNFMSAQSA KTYGLVDEVL ETRAALNVAP YHMDK
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