Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Bphyt_3167 |
Symbol | |
ID | 6282566 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Burkholderia phytofirmans PsJN |
Kingdom | Bacteria |
Replicon accession | NC_010681 |
Strand | + |
Start bp | 3568034 |
End bp | 3568240 |
Gene Length | 207 bp |
Protein Length | 68 aa |
Translation table | 11 |
GC content | 53% |
IMG OID | 642622741 |
Product | cold-shock DNA-binding domain protein |
Protein accession | YP_001896783 |
Protein GI | 187925141 |
COG category | [K] Transcription |
COG ID | [COG1278] Cold shock proteins |
TIGRFAM ID | [TIGR02381] cold shock domain protein CspD |
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Plasmid Coverage information |
Num covering plasmid clones | 2 |
Plasmid unclonability p-value | 0.0000000493488 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
Num covering fosmid clones | 17 |
Fosmid unclonability p-value | 0.00220171 |
Fosmid Hitchhiker | Yes |
Fosmid clonability | hitchhiker |
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Sequence |
Gene sequence | ATGGCAACTG GTACGGTCAA ATGGTTCAAT GACGCAAAAG GTTTCGGATT CATCACGCCT GACGAAGGTG GTGAGGATCT GTTTGCACAC TTCTCGGCCA TCCAGATGAA TGGGTTCAAG ACCCTGAAGG AAGGCCAAAA GGTGACCTTC GAGGTCGTGC AAGGCCCGAA AGGCAAACAG GCATCGAACA TCCAGGCACC TGCCTGA
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Protein sequence | MATGTVKWFN DAKGFGFITP DEGGEDLFAH FSAIQMNGFK TLKEGQKVTF EVVQGPKGKQ ASNIQAPA
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