Gene Bphyt_3161 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBphyt_3161 
Symbol 
ID6280860 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia phytofirmans PsJN 
KingdomBacteria 
Replicon accessionNC_010681 
Strand
Start bp3559131 
End bp3560345 
Gene Length1215 bp 
Protein Length404 aa 
Translation table11 
GC content65% 
IMG OID642622735 
Productbifunctional phosphopantothenoylcysteine decarboxylase/phosphopantothenate synthase 
Protein accessionYP_001896777 
Protein GI187925135 
COG category[H] Coenzyme transport and metabolism 
COG ID[COG0452] Phosphopantothenoylcysteine synthetase/decarboxylase 
TIGRFAM ID[TIGR00521] phosphopantothenoylcysteine decarboxylase/phosphopantothenate--cysteine ligase, prokaryotic 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value0.963804 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones18 
Fosmid unclonability p-value0.00468963 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
TTGGCAACCG CAGAACTCGC AGGAAAACAC CTCGTCCTCG GCATGACGGG CGGCATTGCC 
TGCTACAAGA TCGCCGAACT CACGCGTCTG TTGACCAAGG CCGGCGCGAC CGTGCAGGTC
GTCATGACCG AAGCGGCCAC GCAGTTCATC ACCCCCGTCA CCATGCAGGC GCTCTCGGGC
CGCCCGGTCT ACACGAGCCA GTGGGACGGG CGCGTGCCGA ACAACATGGC GCACATCGAT
CTGTCGCGTG AAGCGGATGC GATCGTGATC GCGCCCGCCT CGACCGACTT CCTCGCCAAA
CTCGCGCACG GCATGGCCGA CGATTTGCTG TCCACGTTGT GTGTCGCCCG CGATTGTCCG
CTGCTGGTGG TGCCGGCCAT GAACCGGCAG ATGTGGCAGA ACCCGGCCAC GCAACGCAAC
GTCGCGCAAG TGCGCGCGGA CGGCATCGAA GTACTCGGGC CCGATTCCGG CCCGCAAGCG
TGCGGCGAAG TCGGCGACGG CCGCATGCTC GAAGCGGCCG CCACTTACGA AGCGATCGCC
TCGTTCTTCG CGCCGAAAAT TCTCGCCGGC AAGCGTGTGC TGCTGACCGC CGGGCCAACG
TTCGAACCGC TCGACCCGGT ACGCGGCATC ACCAACCGCT CCAGCGGCAA GATGGGCTTT
GCGCTGGCGC GCGCCGCGCA GCAGGCGGGC GCCGAGGTGC ATTTGATCGC CGGTCCCGTC
GCGCTCGAAA CGCCGTGGGG CGTTTTCCGT CAGGACGTGC AGACCGCGCA GCAGATGCAT
GACGCGGTGA TGCGCTCGGT CGCGGACGCC GACATATTCA TCGGCGTGGC CGCAGTGGCC
GACTGGCGTG TCGATCACGC CAGCGAGCAC AAGATCAAGA AGACTGCGGA GCGTGCGCTG
CCCACGTTTT CCTTCGTTGA AAATCCGGAC ATTCTGGCCT CGGTGGCGAA GCTGCCGCAT
CCGCCGTTCA CGGTCGGCTT TGCCGCCGAA AGCGGCGATC TGGAAGTTCA CGGCGAAGAA
AAACGCGTGC GCAAAAACGT GCCGCTTCTG ATCGGCAATC TCGGCCCGCT GACCTTCGGC
CTCGACGATA ACGAAGTGAT CCTGTTCGAA GCAGGCGGCG CGACGAAGCT GCCACGCGCC
GACAAGCAGA CGCTCGCGCG CGCGCTGATC GCGGAGATCG CGAAGCGTCT GCCCGACACA
AGTCTGATTC GCTGA
 
Protein sequence
MATAELAGKH LVLGMTGGIA CYKIAELTRL LTKAGATVQV VMTEAATQFI TPVTMQALSG 
RPVYTSQWDG RVPNNMAHID LSREADAIVI APASTDFLAK LAHGMADDLL STLCVARDCP
LLVVPAMNRQ MWQNPATQRN VAQVRADGIE VLGPDSGPQA CGEVGDGRML EAAATYEAIA
SFFAPKILAG KRVLLTAGPT FEPLDPVRGI TNRSSGKMGF ALARAAQQAG AEVHLIAGPV
ALETPWGVFR QDVQTAQQMH DAVMRSVADA DIFIGVAAVA DWRVDHASEH KIKKTAERAL
PTFSFVENPD ILASVAKLPH PPFTVGFAAE SGDLEVHGEE KRVRKNVPLL IGNLGPLTFG
LDDNEVILFE AGGATKLPRA DKQTLARALI AEIAKRLPDT SLIR