Gene Bphyt_3141 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBphyt_3141 
Symbol 
ID6282918 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia phytofirmans PsJN 
KingdomBacteria 
Replicon accessionNC_010681 
Strand
Start bp3536898 
End bp3537614 
Gene Length717 bp 
Protein Length238 aa 
Translation table11 
GC content61% 
IMG OID642622715 
ProductABC transporter related 
Protein accessionYP_001896757 
Protein GI187925115 
COG category[E] Amino acid transport and metabolism 
COG ID[COG0410] ABC-type branched-chain amino acid transport systems, ATPase component 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value0.0818776 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones38 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCTACAG CAATGTTGAA AATCAAGGGC CTGCAGGTCA ATTACGGCGG CATCCAGGCA 
GTCAAGGGGA TCGATCTCGA GGTCGCGCAG GGCGAACTGG TCACGCTGAT CGGCGCGAAC
GGCGCGGGCA AGACCACGAC GATGAAGGCG ATCACGGGTC TGAAGCCCTA CACGATCGGC
GACATCGAGT ACATGGGCGA GTCGATCAAG GGCGTGCCGC CGCATCTGCT GTTGAAGAAG
GGTCTGGCAA TGGTGCCGGA AGGGCGCGGC ATCTTCGCGC GCATGTCGAT CGTCGAAAAC
ATGCAGATGG GTGCTTATCT GCGTACGGAT ACGGACGGCA TCAAGGCGGA CGTCGATCGC
ATGTTCGGTT TTTTCCCGCG TCTGAAGGAG CGTGCGGCGC AGTACGCCGG CACGCTTTCG
GGCGGCGAAC AGCAGATGCT GGCGATGGCG CGCGCGATCA TCTCGCGTCC GAAGCTGTTG
TTGCTTGACG AGCCGTCGAT GGGCCTGTCG CCGATCATGG TCGAGAAGAT CTTCGAAGTG
GTGCGGGCGA TTTCGGCTGA AGGCATGACC GTGCTGCTGG TCGAGCAGAA CGCGCGTCTG
GCGCTGCAGG CAGCGAATCG CGGTTACGTG ATGGACTCGG GTCTGGTCAC GATGTCGGGT
GACGCGAAGC AGATGCTGGA TGATCCGAAG GTGCGGGCAG CGTATTTGGG TGAATAA
 
Protein sequence
MATAMLKIKG LQVNYGGIQA VKGIDLEVAQ GELVTLIGAN GAGKTTTMKA ITGLKPYTIG 
DIEYMGESIK GVPPHLLLKK GLAMVPEGRG IFARMSIVEN MQMGAYLRTD TDGIKADVDR
MFGFFPRLKE RAAQYAGTLS GGEQQMLAMA RAIISRPKLL LLDEPSMGLS PIMVEKIFEV
VRAISAEGMT VLLVEQNARL ALQAANRGYV MDSGLVTMSG DAKQMLDDPK VRAAYLGE