Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Bphyt_3131 |
Symbol | |
ID | 6284440 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Burkholderia phytofirmans PsJN |
Kingdom | Bacteria |
Replicon accession | NC_010681 |
Strand | - |
Start bp | 3525906 |
End bp | 3527828 |
Gene Length | 1923 bp |
Protein Length | 640 aa |
Translation table | 11 |
GC content | 65% |
IMG OID | 642622705 |
Product | ABC transporter related |
Protein accession | YP_001896747 |
Protein GI | 187925105 |
COG category | [R] General function prediction only |
COG ID | [COG1123] ATPase components of various ABC-type transport systems, contain duplicated ATPase |
TIGRFAM ID | [TIGR02323] phosphonate C-P lyase system protein PhnK |
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Plasmid Coverage information |
Num covering plasmid clones | 7 |
Plasmid unclonability p-value | 0.022829 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 37 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | GTGCCGACTT CATCGCACAC CGCCCGTCCG CTTATCGAAA CCTTGCCGCC GCAACGCGTG CTCGCGGTCG ACGATCTGTC GGTCGCCTTC CGCAGCGGCG ACACCACCTT CAACGCGGTG CGCAATCTGT CGCTGACGGT CGAGCGCGGC GAGACGCTGG CGATCGTCGG CGAATCGGGT TCGGGCAAAT CAGTGACCTC GCTCGCGTTG ATGCGGCTGA TCGAGCATGG CGGTGGGCGC CTTGCCGGCG GCAGCATCGC TTTCCGGCGC CGCGACGGCA GCGTGCTCGA CCTCGCGAAA GCGTCGTCCG GCACGATGCG TTCGATTCGC GGCGCCGACA TCGCGATGAT CTTTCAGGAG CCGATGACCT CGCTCAATCC GGTCTTCACG GTGGGCGATC AGATCAGCGA GGCGATCGCG TTGCACCAGG GTAAGAGCCG CTCTGCCGCG CACGCTGAAA CGCTGCGTCT GCTCGAACTC GTGCGTATTC CTGAAGCGCG GCGCGTGGCG GCGCGGTTTC CGCATCAACT GTCGGGCGGC ATGCGTCAAC GCGTGATGAT CGCGATGGCG CTGTCGTGCA AACCTGCATT GCTGATCGCC GACGAGCCGA CCACCGCGCT CGACGTGACG ATCCAGGCGC AGATTCTGCA ACTGATCCGC GGCTTGCAGG ACGAGATGAA CATGGGCGTG ATTTTCATCA CGCACGACAT GGGTGTGGTC GCCGAAGTGG CGGACCGCGT GCTGGTGATG TATCGCGGCG AGAAGGTGGA AGAGGGCGCT TCCGACGCGT TGTTCGCCGC GCCTTCGCAT CCTTATACGA AGGCGTTGCT CGCCGCCGTG CCGCGTCTCG GCGCGATGCA AGGCACCGAT CAGCCGGCCA AGTTTCCGAT CCTGACCGTC GAGCAGGCGA GCCTGAGCGG CACTTACCAG GCCGTGCGTC CCGCTGCCGC TGTCGCGGAA GAAACGCAGC CGCTGGTGCA GGAAACCACC CCGCCCATTC TGCGAGTTCG CGATCTGGTC ACGCGCTTTC CGGTCAAGAG CGGATTGTTC GGCCGCCTAA CGGGCCGCGT GCATGCGGTG GAAAAAGTCA GCTTCGATTT GCGGCCCGGC GAAACGCTCG CACTGGTCGG CGAATCCGGT TGCGGCAAAT CGACCACGGG CCGCTCGCTG CTGCGTCTGG TCGAAAGTCA AAGCGGGTCG ATCGAATTCA ACGGCAAGGA AATCAGTTCG CTGACCGGCC CCGCGTTGCA GGCGCTGCGG CGCGATATCC AGTTTATTTT CCAGGACCCG TTCGCTTCGC TGAATCCGCG TTTGACGGTT GGCTTCTCGA TCATGGAGCC GTTGCTCGTG CACGGCGTCG CGCAAGGCGC CGAAGCGCAG GCGCGGGTGC AGTGGCTGCT CGACAAAGTC GGTTTGCCCT CCGAAGCCGC GCGGCGCTAT CCGCACGAAT TCTCCGGCGG TCAGCGGCAA CGCATCGCGA TTGCGCGCGC GCTGGCGTTG AACCCGAAGG TCGTAATCGC CGACGAATCC GTGTCGGCGC TCGACGTCTC CGTGCAAGCG CAGATCGTCA ATCTGATGCT CGATTTGCAG CGTGAACTTG GCGTCGCGTA TCTGTTCATT TCGCACGACA TGGCCGTGGT CGAACGCGTC AGTCATCGCG TCGCGGTGAT GTATCTCGGC CAGATCGTCG AAATCGGCCC GCGCCGCGCG GTGTTCGAAG CGCCGCAGCA TCCGTACACG CGCAAGCTGA TGGGCGCGGT GCCGGTTGCC GATCCGGCGC GCCGTCACGC AAAGCGCATG CTCGCCGCCG ACGAGATTCC GAGCCCGATC CGCGCGCTGA ACGATGAGCC TATCGTGGCC CCGCTCGTCG CAGTCGGCCC GGATCATTTC GTCGCCCAGC ATCACGTGGG CGGCGCGTAC TAA
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Protein sequence | MPTSSHTARP LIETLPPQRV LAVDDLSVAF RSGDTTFNAV RNLSLTVERG ETLAIVGESG SGKSVTSLAL MRLIEHGGGR LAGGSIAFRR RDGSVLDLAK ASSGTMRSIR GADIAMIFQE PMTSLNPVFT VGDQISEAIA LHQGKSRSAA HAETLRLLEL VRIPEARRVA ARFPHQLSGG MRQRVMIAMA LSCKPALLIA DEPTTALDVT IQAQILQLIR GLQDEMNMGV IFITHDMGVV AEVADRVLVM YRGEKVEEGA SDALFAAPSH PYTKALLAAV PRLGAMQGTD QPAKFPILTV EQASLSGTYQ AVRPAAAVAE ETQPLVQETT PPILRVRDLV TRFPVKSGLF GRLTGRVHAV EKVSFDLRPG ETLALVGESG CGKSTTGRSL LRLVESQSGS IEFNGKEISS LTGPALQALR RDIQFIFQDP FASLNPRLTV GFSIMEPLLV HGVAQGAEAQ ARVQWLLDKV GLPSEAARRY PHEFSGGQRQ RIAIARALAL NPKVVIADES VSALDVSVQA QIVNLMLDLQ RELGVAYLFI SHDMAVVERV SHRVAVMYLG QIVEIGPRRA VFEAPQHPYT RKLMGAVPVA DPARRHAKRM LAADEIPSPI RALNDEPIVA PLVAVGPDHF VAQHHVGGAY
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