Gene Bphyt_3040 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBphyt_3040 
Symbol 
ID6283240 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia phytofirmans PsJN 
KingdomBacteria 
Replicon accessionNC_010681 
Strand
Start bp3429943 
End bp3430452 
Gene Length510 bp 
Protein Length169 aa 
Translation table11 
GC content64% 
IMG OID642622608 
Productdisulfide bond formation protein B 
Protein accessionYP_001896656 
Protein GI187925014 
COG category[O] Posttranslational modification, protein turnover, chaperones 
COG ID[COG1495] Disulfide bond formation protein DsbB 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones21 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones18 
Fosmid unclonability p-value0.0055953 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
ATGAATAACG ACACTGCAAT GCTGCGCCGC GAGCGCTCCC TGCTGGTTCT GCTTGGCCTG 
ATCTGCGTCG CCCTCGTGGG TGGCGCGCTG TACCTGCAGT ATTTCCTGCA CGAAGACCCC
TGCCCGTTGT GCATCATCCA GCGGTATTTC TTCCTGCTGA TCGCGATCTT CGCGTTCCTC
GGCGCGCGTT TCAACAACTG GCGCGGCGTG CGTCTGCTCG AAGTGCTGGC GGCCCTGTCG
GCGCTGGCCG GTATCGTCAC GGCCGTGCGT CATGTGTATG TTCAGGCGAA TCCGGGCTTT
AGCTGCGGCT TCGACGCGCT GCAGCCGCTG GTCGACAGCT TGCCGCCCGC GCATTGGCTG
CCGGGCGTGT TCAAGGTCGC CGGCCTGTGC GAAACGGCCT ATCCGCCGAC TCTGGGTCTG
ACGCTGCCGC AATGGTCGCT GGTCGCATTC GTGGTCGCTT TCATCCCGCT GGTGCTGACG
CTGGTTCGCA ACCGTCGCCG GATTGCCTGA
 
Protein sequence
MNNDTAMLRR ERSLLVLLGL ICVALVGGAL YLQYFLHEDP CPLCIIQRYF FLLIAIFAFL 
GARFNNWRGV RLLEVLAALS ALAGIVTAVR HVYVQANPGF SCGFDALQPL VDSLPPAHWL
PGVFKVAGLC ETAYPPTLGL TLPQWSLVAF VVAFIPLVLT LVRNRRRIA