Gene Bphyt_3032 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBphyt_3032 
Symbol 
ID6281608 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia phytofirmans PsJN 
KingdomBacteria 
Replicon accessionNC_010681 
Strand
Start bp3420615 
End bp3421346 
Gene Length732 bp 
Protein Length243 aa 
Translation table11 
GC content60% 
IMG OID642622600 
Productputative exported lipoprotein 
Protein accessionYP_001896648 
Protein GI187925006 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value0.338968 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones17 
Fosmid unclonability p-value0.00314115 
Fosmid HitchhikerNo 
Fosmid clonabilitydecreased coverage 
 

Sequence

Gene sequence
ATGAAGTATT CCTTATTAAT GCGGCGCGCC ATGCTGCTCG CAGCCTCGTG TGCGCTATTG 
CAGCAGGGCG GGTTTGTGCT GGCCGCGCAA GGCGACGAGG CCGCGCCGCT GGTTGGCACA
CGGCCGGCCA TCAATACGCT GACGCCGCAG CCTGTCGCCG ACGCGCTGCG CAACGCTGCA
TCTGCATCAG CCACGTCGCC CGCATCGCCC ACGGCGGGCG ATGCGCAAGG CAATGTCGCC
GAACTGATGC AGATGATTCA CGACGCGAAG CTGAGCGAAC TGCGCACCAC GTATAACGGC
AGTTACGGCG CCAGTCTGTT TTTCCATCCG CGGGAAATGA CGTACTACAT CGCGTTATTT
CAGGACAAGC ATTTCTGGCG TGTGATCAAG ACCGAGGACA TGGCGCGCGC AGAAGCGATC
TATGCGGGCT TTGGCCAGCA GACAGCGCAA CTCGCGGATG TCGAGATTCG CCGCACGCAG
TTGCAGGCGC AGAAGGCGTA TATCGAAGAC GTGATTGCCA TGTCCGAAGA TCGCGCGAAA
CGCCTGCAAG CCGATCTCGA CGTGGCTCGC ACACAAGAGG CCAAGGTCAA CGACTATCAG
CGTCAAACCC AAGGTGAAGC GGTCACGCTG CATGCCGAGA AGGAAAGAGT GCAAGCGCAG
TTGCGCCAGG TGCAGGGCGA AGTGATGCAG TTGCAGCGGC AAACTGAAAT GGGATTGCCG
GTTCAGAAGT AA
 
Protein sequence
MKYSLLMRRA MLLAASCALL QQGGFVLAAQ GDEAAPLVGT RPAINTLTPQ PVADALRNAA 
SASATSPASP TAGDAQGNVA ELMQMIHDAK LSELRTTYNG SYGASLFFHP REMTYYIALF
QDKHFWRVIK TEDMARAEAI YAGFGQQTAQ LADVEIRRTQ LQAQKAYIED VIAMSEDRAK
RLQADLDVAR TQEAKVNDYQ RQTQGEAVTL HAEKERVQAQ LRQVQGEVMQ LQRQTEMGLP
VQK